Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 Y_RNA.667-201ENST00000516212 107 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 SCARNA18.1-201ENST00000516330 83 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC027026.1-201ENST00000532323 742 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC244502.2-201ENST00000543361 851 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC018552.1-201ENST00000562099 811 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 MIR4509-3-201ENST00000578671 94 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 MIR4509-2-201ENST00000583920 94 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC125494.3-201ENST00000602759 455 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 MIR6809-201ENST00000612189 116 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 MIR7973-1-201ENST00000614683 76 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 MIR4509-1-201ENST00000618224 94 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AL121890.3-201ENST00000618494 516 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC069234.4-201ENST00000621276 412 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC129915.3-201ENST00000634128 948 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 OR10R3P-201ENST00000361688 942 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AL096800.1-201ENST00000405326 893 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 IPPKP1-201ENST00000422501 768 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AL389925.1-201ENST00000432257 728 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC084754.1-201ENST00000463466 464 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 PSAT1P4-201ENST00000466500 526 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 RPS4XP6-201ENST00000477670 797 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 RPL7P40-201ENST00000481703 745 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 RN7SL193P-201ENST00000491708 276 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 RNA5SP438-201ENST00000516561 112 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AP002812.4-201ENST00000532139 286 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 NPM1P47-201ENST00000560843 856 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC005244.1-201ENST00000582566 339 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF92P3-201ENST00000596594 954 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AL022067.1-201ENST00000602426 454 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC024595.1-201ENST00000623088 387 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 GNL2P1-201ENST00000451274 2190 ntBASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.68□□□□□ -1.34
COL4A3BPQ9Y5P4 AL137100.1-201ENST00000556703 1620 ntBASIC6.68□□□□□ -1.34
COL4A3BPQ9Y5P4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A3BPQ9Y5P4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
COL4A3BPQ9Y5P4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A3BPQ9Y5P4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
COL4A3BPQ9Y5P4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms