Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 TMSB4XP2-201ENST00000335179 210 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 RNU4-28P-201ENST00000364739 141 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 SNORA70.9-201ENST00000384370 135 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 PTCD2P2-201ENST00000415579 1095 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 RPS15AP30-201ENST00000420976 390 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AL731534.1-201ENST00000434711 269 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 CR769776.1-201ENST00000441254 787 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 CALM1P2-201ENST00000452941 448 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 GTF2IP12-201ENST00000456547 356 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 UBFD1P1-201ENST00000473259 814 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC079080.1-201ENST00000479841 822 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 RPL23AP40-201ENST00000487630 390 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 RPS27AP16-201ENST00000492222 470 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 RNA5SP438-201ENST00000516561 112 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC005412.1-201ENST00000580812 1049 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC012254.4-201ENST00000588843 273 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC245036.5-201ENST00000596330 847 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC012557.1-201ENST00000607115 611 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC120349.3-201ENST00000624377 529 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 AC130360.2-201ENST00000533477 1556 ntBASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB1Q9Y5F3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 SNX18P3-202ENST00000565670 1750 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 DNM1P47-203ENST00000571780 12667 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 RNU105B-201ENST00000364478 208 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AL451142.1-201ENST00000375867 775 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 RN7SKP166-201ENST00000410812 305 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 Z93019.1-201ENST00000416450 973 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC005005.2-201ENST00000420779 380 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 OR5W1P-201ENST00000423705 938 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC130360.1-201ENST00000425489 1117 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 HSPE1P16-201ENST00000426640 348 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC002553.3-201ENST00000453002 341 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 RPL7L1P4-201ENST00000513004 707 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 IGHV3-63-201ENST00000518422 341 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC130365.2-201ENST00000525882 1201 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 AC090022.1-201ENST00000546569 311 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 OR4U1P-201ENST00000554958 912 ntBASIC6.04□□□□□ -1.44
PCDHB1Q9Y5F3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms