Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC090589.1-201ENST00000473109 362 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AL136038.1-201ENST00000497246 351 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC104109.1-201ENST00000498563 436 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 CDC42P3-201ENST00000518493 633 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 IGLVIV-64-201ENST00000518581 301 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 IGKV3D-34-201ENST00000522638 302 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AC004817.4-201ENST00000602396 3625 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 OR55B1P-203ENST00000641518 2602 ntBASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TRAPPC4Q9Y296 AL034549.2-201ENST00000618285 3373 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 SRSF1P1-201ENST00000424058 520 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 PRUNEP1-201ENST00000425846 705 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC012075.1-201ENST00000436549 580 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AL136455.1-201ENST00000441083 1240 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AL591473.1-201ENST00000464297 313 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC100832.1-201ENST00000471945 383 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC138938.1-201ENST00000515431 782 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 SCARNA20.4-201ENST00000516969 131 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC005341.1-201ENST00000571086 708 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 SNORD95-201ENST00000579879 68 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 RN7SL356P-201ENST00000582228 248 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC109583.2-201ENST00000617367 129 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 MIR8080-201ENST00000622224 89 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC015871.5-202ENST00000623252 701 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 AC009950.2-201ENST00000636548 183 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 SAMMSON-209ENST00000641222 1100 ntBASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRAPPC4Q9Y296 MTCO1P7-201ENST00000419523 1542 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AL138820.1-201ENST00000617901 5305 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 DBIP1-201ENST00000401435 260 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 GSTM5P1-201ENST00000434751 660 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 RPS11P7-201ENST00000442125 465 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 GAPDHP25-201ENST00000447061 1001 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 RANP1-206ENST00000455094 651 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 RPL7P45-201ENST00000455851 743 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC092754.1-201ENST00000472975 479 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 RPL5P22-201ENST00000480199 884 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 RPS24P16-201ENST00000497294 392 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 IGBP1P4-201ENST00000503202 879 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 BNIP3P1-201ENST00000547295 580 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 BLZF2P-201ENST00000553776 1130 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 OR11H3P-201ENST00000554547 982 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC011445.2-201ENST00000599274 173 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC000068.2-201ENST00000608816 460 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms