Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 NPM1P42-201ENST00000560329 862 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 BMS1P7-201ENST00000602440 1052 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 AL512329.2-201ENST00000607350 548 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC068880.4-201ENST00000623082 495 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 AP003476.1-201ENST00000623984 516 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL592429.1-201ENST00000403909 1473 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL359955.1-201ENST00000455242 3275 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL451142.1-201ENST00000375867 775 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 MIR551A-201ENST00000385042 96 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 MT-RNR2-201ENST00000387347 1559 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 NANOGP4-201ENST00000427230 913 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 DSTNP5-201ENST00000427921 523 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 CNOT7P2-201ENST00000441051 832 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC245047.2-201ENST00000441060 530 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 HMGN1P5-201ENST00000448591 263 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 TVP23BP2-201ENST00000455082 615 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC115223.1-201ENST00000466377 870 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC005532.2-201ENST00000467154 373 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC093801.2-201ENST00000503966 1050 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 RBM22P1-201ENST00000578589 1214 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 MIR4760-201ENST00000585040 80 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL158050.2-201ENST00000605336 568 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL445528.2-201ENST00000620582 470 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 MIR6837-201ENST00000620884 64 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC095038.2-201ENST00000621464 1070 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL445984.1-201ENST00000637834 659 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 AC018809.2-201ENST00000602436 3823 ntBASIC6.29□□□□□ -1.4
COL20A1Q9P218 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL20A1Q9P218 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL20A1Q9P218 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 OFD1P17-201ENST00000437639 3018 ntBASIC6.28□□□□□ -1.4
COL20A1Q9P218 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL20A1Q9P218 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL20A1Q9P218 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 AC078880.4-201ENST00000617627 1749 ntBASIC6.28□□□□□ -1.4
COL20A1Q9P218 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 RNA5SP339-201ENST00000390987 122 ntBASIC6.28□□□□□ -1.4
COL20A1Q9P218 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 AP000534.2-201ENST00000412729 568 ntBASIC6.28□□□□□ -1.4
COL20A1Q9P218 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.28□□□□□ -1.4
COL20A1Q9P218 RNGTTP1-201ENST00000420965 728 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms