Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 WDR95P-201ENST00000425638 1542 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AL159987.1-201ENST00000347911 293 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 SNORA63.3-201ENST00000362682 132 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 GCNT6-201ENST00000379591 934 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 RNU6-532P-201ENST00000384318 107 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC005042.1-201ENST00000393397 800 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AL022331.1-201ENST00000429025 477 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 BX119904.1-201ENST00000432026 348 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 MTCYBP21-201ENST00000443300 1113 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 LINC02210-201ENST00000444561 288 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AL035551.1-201ENST00000446931 348 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC022431.1-201ENST00000450941 438 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 HMGB1P5-202ENST00000451497 985 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 CLIC4P1-201ENST00000453177 535 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC107398.1-201ENST00000486904 505 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC009120.1-201ENST00000493458 473 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 NENFP3-201ENST00000503735 313 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC027216.1-201ENST00000577726 685 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC144521.1-201ENST00000607148 956 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AC073593.1-201ENST00000624500 411 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 AL121839.2-201ENST00000565058 6943 ntBASIC5.45□□□□□ -1.54
BRF2Q9HAW0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 NEPNP-201ENST00000404786 1371 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 RNA5SP30-201ENST00000365552 115 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 ATP5F1P6-201ENST00000402768 767 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC096921.1-201ENST00000411661 375 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 MRPS21P2-201ENST00000424704 264 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 UBE2D3P3-201ENST00000426992 425 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 PCBP2P1-201ENST00000437262 977 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 NANOGP9-201ENST00000439890 892 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 HMGB1P26-201ENST00000452520 628 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 RPS3AP15-201ENST00000483874 781 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 AC092902.1-201ENST00000486999 259 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 RPL32P33-201ENST00000487023 394 ntBASIC5.44□□□□□ -1.54
BRF2Q9HAW0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
BRF2Q9HAW0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms