Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 MIR223-201ENST00000385204 110 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 MIR937-201ENST00000401271 86 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AL139148.1-201ENST00000427122 680 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 MED28P3-201ENST00000444288 531 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AL606517.1-201ENST00000446914 387 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 DEFB109A-201ENST00000482450 265 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC093270.2-201ENST00000486157 792 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC082651.2-201ENST00000496833 166 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 RN7SKP99-201ENST00000517028 307 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AP003102.1-201ENST00000525638 661 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AL121594.4-201ENST00000556211 1196 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC090912.3-201ENST00000609775 533 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC004948.1-201ENST00000609858 672 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AL356490.1-201ENST00000623079 479 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC006963.1-201ENST00000624003 1052 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC068057.2-201ENST00000624047 895 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 MAPK10-328ENST00000641553 4009 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC005224.3-201ENST00000584683 2140 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 RNU6-819P-201ENST00000364116 107 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 RNU6-883P-201ENST00000384597 107 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 MTATP6P26-201ENST00000445926 662 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC073072.2-201ENST00000447425 348 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 RPL7P45-201ENST00000455851 743 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 RN7SL172P-201ENST00000460535 303 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC005532.2-201ENST00000467154 373 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC111000.6-201ENST00000514471 709 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 SNORA70.17-201ENST00000516449 133 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC021733.2-201ENST00000518830 497 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC126615.2-201ENST00000553003 515 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC090286.3-201ENST00000573133 187 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AC012616.1-201ENST00000600294 197 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 AL713998.2-201ENST00000604538 1198 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 BNIP3P19-201ENST00000605397 577 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 CU459211.1-201ENST00000635667 749 ntBASIC5.8□□□□□ -1.48
EBF3Q9H4W6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EBF3Q9H4W6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms