Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 MTND5P33-201ENST00000571250 1450 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 MAPK10-354ENST00000641823 2732 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 RNA5SP472-201ENST00000363868 119 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.193-201ENST00000363979 102 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 MTCYBP36-201ENST00000404146 440 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.618-201ENST00000410949 107 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC096644.3-201ENST00000416788 338 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC005099.1-201ENST00000442083 610 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 SNRPFP4-201ENST00000456366 242 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 RPL38P1-201ENST00000460914 211 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC010301.1-201ENST00000473936 355 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AL136038.1-201ENST00000497246 351 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 NPY6R-201ENST00000503807 1112 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AL671862.1-201ENST00000515851 349 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC084337.1-201ENST00000524809 686 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC090424.1-201ENST00000535243 736 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC005832.3-201ENST00000537929 631 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC243972.3-201ENST00000539655 198 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 HIF1AP1-201ENST00000553642 175 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 NUTF2P8-201ENST00000604593 363 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AP004372.1-201ENST00000604842 844 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC024560.3-201ENST00000608482 349 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC099676.1-201ENST00000608886 657 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC090527.3-201ENST00000619041 548 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC183089.2-201ENST00000637931 916 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC114786.1-201ENST00000512892 1415 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC091132.4-201ENST00000587960 2262 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 ZNF840P-201ENST00000504759 1996 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 HERC2P8-202ENST00000564334 3705 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 RNU6-707P-201ENST00000364647 95 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 RNU6-621P-201ENST00000364752 109 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 SNORA70G-201ENST00000383923 142 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.474-201ENST00000384341 102 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 HMGB3P20-201ENST00000417997 600 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 SNRPEP10-201ENST00000420249 274 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC092647.1-201ENST00000420654 287 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms