Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 MIR191-201ENST00000384873 92 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 MIR1284-201ENST00000408337 120 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 USP9YP33-201ENST00000412220 421 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC062016.2-201ENST00000420950 676 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 CDC42P6-201ENST00000421246 576 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 GSTA6P-201ENST00000424144 582 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 RPS10P21-201ENST00000430654 475 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC242426.1-201ENST00000435270 960 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 USP9YP35-201ENST00000435696 412 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AL672138.1-201ENST00000450604 1015 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC104689.1-201ENST00000473356 768 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 RPL7P41-201ENST00000485823 957 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC069304.1-201ENST00000491593 704 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC025674.1-201ENST00000507074 324 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 MTATP6P22-201ENST00000507369 598 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 MTCO3P7-201ENST00000510008 774 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 MTCYBP37-201ENST00000510642 1133 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 HMGB3P13-201ENST00000511263 607 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC027309.2-201ENST00000520566 192 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC087752.2-201ENST00000521219 281 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AP006587.5-201ENST00000532033 739 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 BLZF2P-201ENST00000553776 1130 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AC092650.2-201ENST00000619984 902 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 AL512329.1-201ENST00000404600 1592 ntBASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRAIPQ9BWF2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 AC022819.1-201ENST00000563495 3910 ntBASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 AC022507.1-201ENST00000548349 1505 ntBASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRAIPQ9BWF2 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms