Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP005119.2-201ENST00000579735 1105 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 MIR6853-201ENST00000619642 74 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 MIR6830-201ENST00000636015 70 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.7□□□□□ -1.34
ABCA3Q99758 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
ABCA3Q99758 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
ABCA3Q99758 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.7□□□□□ -1.34
ABCA3Q99758 OR56B2P-202ENST00000641377 2453 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.7□□□□□ -1.34
ABCA3Q99758 TTC3P1-201ENST00000399586 6081 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
ABCA3Q99758 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.7□□□□□ -1.34
ABCA3Q99758 RNA5SP345-201ENST00000410646 108 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.7□□□□□ -1.34
ABCA3Q99758 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.7□□□□□ -1.34
ABCA3Q99758 RN7SKP92-201ENST00000517266 244 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.7□□□□□ -1.34
ABCA3Q99758 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.7□□□□□ -1.34
ABCA3Q99758 AL034408.1-201ENST00000637712 664 ntBASIC6.7□□□□□ -1.34
ABCA3Q99758 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ABCA3Q99758 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
ABCA3Q99758 AC099654.2-201ENST00000433031 1980 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.69□□□□□ -1.34
ABCA3Q99758 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 ASNSP1-204ENST00000641977 1664 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 MIR589-201ENST00000385238 99 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ABCA3Q99758 Z97832.1-201ENST00000402490 328 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 AC023141.6-201ENST00000429418 337 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.69□□□□□ -1.34
ABCA3Q99758 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.69□□□□□ -1.34
ABCA3Q99758 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.69□□□□□ -1.34
ABCA3Q99758 AL020997.2-201ENST00000602607 184 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 AC125257.1-201ENST00000560400 2930 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.69□□□□□ -1.34
ABCA3Q99758 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.69□□□□□ -1.34
ABCA3Q99758 AC079298.1-201ENST00000625026 1619 ntBASIC6.69□□□□□ -1.34
ABCA3Q99758 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ABCA3Q99758 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
ABCA3Q99758 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ABCA3Q99758 NCLP2-201ENST00000416078 1462 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 IGKV7-3-201ENST00000357453 298 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.68□□□□□ -1.34
ABCA3Q99758 RNA5SP397-201ENST00000391323 118 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.68□□□□□ -1.34
ABCA3Q99758 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.68□□□□□ -1.34
ABCA3Q99758 RPL7AP52-201ENST00000458096 790 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 RN7SL441P-201ENST00000492388 296 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 AK3P4-201ENST00000504283 583 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.68□□□□□ -1.34
ABCA3Q99758 VN1R85P-201ENST00000601587 426 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 AL139041.1-201ENST00000605480 610 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.68□□□□□ -1.34
ABCA3Q99758 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.68□□□□□ -1.34
ABCA3Q99758 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ABCA3Q99758 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ABCA3Q99758 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 HYDIN2-203ENST00000614586 13885 ntBASIC6.68□□□□□ -1.34
ABCA3Q99758 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ABCA3Q99758 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
ABCA3Q99758 AC123769.2-201ENST00000624332 5984 ntBASIC6.67□□□□□ -1.34
ABCA3Q99758 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
ABCA3Q99758 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
ABCA3Q99758 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
ABCA3Q99758 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.67□□□□□ -1.34
ABCA3Q99758 AL136116.2-201ENST00000404020 785 ntBASIC6.67□□□□□ -1.34
ABCA3Q99758 RPL12P43-201ENST00000420608 499 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms