Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC010733.1-201ENST00000451515 401 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 AC020779.1-201ENST00000478757 796 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
IFT140Q96RY7 VN1R85P-201ENST00000601587 426 ntBASIC8.45□□□□□ -1.06
IFT140Q96RY7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.45□□□□□ -1.06
IFT140Q96RY7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
IFT140Q96RY7 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.44□□□□□ -1.06
IFT140Q96RY7 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
IFT140Q96RY7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
IFT140Q96RY7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
IFT140Q96RY7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
IFT140Q96RY7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
IFT140Q96RY7 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
IFT140Q96RY7 OR56B2P-202ENST00000641377 2453 ntBASIC8.44□□□□□ -1.06
IFT140Q96RY7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
IFT140Q96RY7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
IFT140Q96RY7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.44□□□□□ -1.06
IFT140Q96RY7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.44□□□□□ -1.06
IFT140Q96RY7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.44□□□□□ -1.06
IFT140Q96RY7 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
IFT140Q96RY7 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
IFT140Q96RY7 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
IFT140Q96RY7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
IFT140Q96RY7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
IFT140Q96RY7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
IFT140Q96RY7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.43□□□□□ -1.06
IFT140Q96RY7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
IFT140Q96RY7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AC011933.2-201ENST00000578539 2790 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AC005034.3-201ENST00000604845 1747 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AL050305.1-201ENST00000399993 1230 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AL359073.1-201ENST00000448036 403 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 AC010618.1-201ENST00000469924 477 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 CYCSP29-201ENST00000533731 318 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 AP000619.2-201ENST00000546014 969 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AC068831.4-201ENST00000556118 109 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AC079414.3-201ENST00000612986 1090 ntBASIC8.42□□□□□ -1.06
IFT140Q96RY7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
IFT140Q96RY7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.42□□□□□ -1.06
IFT140Q96RY7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 AC006210.2-201ENST00000367074 1545 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
IFT140Q96RY7 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 RNA5SP251-201ENST00000410614 137 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 AL158073.1-201ENST00000426848 1104 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 Z95152.1-201ENST00000453556 656 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 AC024941.1-201ENST00000612250 334 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
IFT140Q96RY7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
IFT140Q96RY7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.41□□□□□ -1.06
IFT140Q96RY7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
IFT140Q96RY7 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
IFT140Q96RY7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
IFT140Q96RY7 AC005725.1-201ENST00000577346 2607 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 AC016745.2-201ENST00000608834 3443 ntBASIC8.41□□□□□ -1.06
IFT140Q96RY7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
IFT140Q96RY7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
IFT140Q96RY7 U3.30-201ENST00000391308 210 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms