Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SLC44A1Q8WWI5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SLC44A1Q8WWI5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A1Q8WWI5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A1Q8WWI5 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A1Q8WWI5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A1Q8WWI5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AC073136.1-201ENST00000449426 2884 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 OR9K1P-201ENST00000326513 941 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL121878.1-201ENST00000418638 859 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 RPL17P35-201ENST00000432217 549 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL450023.1-201ENST00000450868 751 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL353718.1-201ENST00000451028 517 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 RPL15P21-201ENST00000495592 567 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 IGKV2-4-201ENST00000523070 340 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL136520.1-202ENST00000555494 763 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AC020978.7-201ENST00000575953 1187 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AP005403.1-201ENST00000579720 229 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AC073111.2-201ENST00000605657 1075 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL390318.1-201ENST00000624564 687 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 AL138960.2-201ENST00000625145 535 ntBASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A1Q8WWI5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A1Q8WWI5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A1Q8WWI5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A1Q8WWI5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SLC44A1Q8WWI5 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A1Q8WWI5 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A1Q8WWI5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 TRIM51GP-201ENST00000534741 1350 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 RN7SKP269-201ENST00000365545 319 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AC007618.1-201ENST00000366455 732 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 SUGT1P2-201ENST00000379452 992 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 DBIP1-201ENST00000401435 260 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 UBE2V1P15-201ENST00000407776 448 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 HMGN1P20-201ENST00000411849 300 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 RPL12P9-201ENST00000412942 488 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AC098592.2-201ENST00000413158 265 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 CDY8P-201ENST00000428380 1279 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 RPS29P14-201ENST00000431518 171 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 TCEA1P3-201ENST00000443005 880 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 CDY20P-201ENST00000447528 1279 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AC021660.1-201ENST00000465006 554 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 RPS24P16-201ENST00000497294 392 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AC109464.1-201ENST00000511091 819 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AC068305.2-201ENST00000550567 1205 ntBASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A1Q8WWI5 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms