Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC023158.1-201ENST00000561632 1025 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 MRPS21P7-201ENST00000566937 238 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC245884.10-201ENST00000597355 337 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC005034.4-201ENST00000603612 899 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 SUGT1P3-202ENST00000604259 383 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC004890.3-201ENST00000605566 1095 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC010245.2-201ENST00000606908 1167 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL355816.2-201ENST00000610049 647 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 MIR6837-201ENST00000620884 64 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 SAMMSON-227ENST00000642114 1199 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 MRRFP1-201ENST00000435941 1675 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC007382.1-201ENST00000624376 2618 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
HMGB4Q8WW32 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 PABPC1P6-201ENST00000445594 1829 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 RNA5SP131-201ENST00000365452 119 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 RNU6-1257P-201ENST00000384625 110 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 TATDN1P1-201ENST00000414123 891 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 PRUNEP1-201ENST00000425846 705 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AL160175.1-201ENST00000428124 247 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 GAPDHP58-201ENST00000438477 1006 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 MTCYBP21-201ENST00000443300 1113 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AL157827.1-201ENST00000447622 132 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 TVP23BP2-201ENST00000455082 615 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 RPL7P39-201ENST00000481157 744 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SYT14P1-201ENST00000481459 721 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 RPS4XP1-201ENST00000482189 787 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 HIGD1AP14-201ENST00000507617 282 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 DUX4L52-201ENST00000549363 777 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC068020.1-201ENST00000594215 661 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC130352.1-201ENST00000602979 661 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC019131.2-201ENST00000609071 870 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC005899.7-201ENST00000618199 588 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC004836.1-201ENST00000623032 634 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 HSPD1P8-201ENST00000400121 1658 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB4Q8WW32 AL592429.1-201ENST00000403909 1473 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.77□□□□□ -1.49
HMGB4Q8WW32 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL161756.3-201ENST00000641216 2071 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC018809.2-201ENST00000602436 3823 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms