Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AC104118.1-201ENST00000607625 1589 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC009229.4-201ENST00000623854 1947 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 RNU2-50P-201ENST00000410494 143 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 RN7SKP166-201ENST00000410812 305 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 OSTCP4-201ENST00000424397 449 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 OR3D1P-201ENST00000438288 955 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AL031681.1-201ENST00000443304 400 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC068135.1-201ENST00000446164 246 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 COX4I1P2-201ENST00000447446 547 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 PTMAP3-201ENST00000447474 330 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 HIGD1AP16-201ENST00000450986 258 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 Z95152.1-201ENST00000453556 656 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC015524.1-201ENST00000491585 472 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC106822.1-201ENST00000502647 526 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 RNU2-45P-201ENST00000516068 187 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 RNU6-347P-201ENST00000516658 105 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 SCARNA1-201ENST00000517138 166 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC095057.3-201ENST00000567102 1157 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC024267.2-201ENST00000582737 417 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC008555.7-201ENST00000605008 583 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 RN7SL261P-201ENST00000613441 282 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC138907.10-201ENST00000623708 983 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC016583.1-201ENST00000624221 2431 ntBASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS37AQ8NEZ2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC100871.1-201ENST00000507871 1456 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 RNU5B-4P-201ENST00000363508 111 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 RNA5SP346-201ENST00000363541 121 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 RNU6-925P-201ENST00000384629 104 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC003045.1-201ENST00000398779 713 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC092745.2-202ENST00000411880 369 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 PTCD2P2-201ENST00000415579 1095 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 RPS7P8-201ENST00000418311 581 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 VN1R37P-201ENST00000419096 748 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 PTP4A1P7-201ENST00000423476 514 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 OR5AW1P-201ENST00000426334 1006 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 TMX2P1-201ENST00000436507 708 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AL031663.1-201ENST00000437445 219 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 CUBNP2-201ENST00000443534 1139 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 RPS4XP12-201ENST00000461747 709 ntBASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS37AQ8NEZ2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms