Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC005618.1-201ENST00000606901 3148 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 RNA5SP350-201ENST00000363298 111 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 RNU6-353P-201ENST00000364266 108 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AL050335.1-201ENST00000396909 869 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 RPS21P8-201ENST00000413365 247 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 MTCO3P41-201ENST00000414801 328 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AL645936.1-201ENST00000441979 518 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC010240.2-201ENST00000445363 1205 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 MTND6P5-201ENST00000448266 512 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 MGAT2P1-201ENST00000449718 797 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 VN1R38P-201ENST00000450265 887 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC107015.1-201ENST00000466902 747 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC117394.1-201ENST00000477323 567 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC021006.1-201ENST00000489849 553 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC021146.8-201ENST00000507455 733 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 NBEAP1-201ENST00000554452 979 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC087465.1-201ENST00000560574 245 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AADACP1-206ENST00000561502 1193 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC090616.1-201ENST00000583895 447 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC068020.1-201ENST00000594215 661 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC130352.1-201ENST00000602979 661 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC073046.2-201ENST00000604756 527 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 AC107075.1-201ENST00000613695 314 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 VN2R3P-201ENST00000422626 1412 ntBASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TRIM48Q8IWZ4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC010624.4-201ENST00000597606 1351 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 FUNDC2P3-201ENST00000334716 533 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 FAM32BP-201ENST00000344033 333 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RNU6-304P-201ENST00000364855 107 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 YWHAZP6-201ENST00000399764 738 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC004074.1-201ENST00000421810 1063 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC019178.2-201ENST00000423595 505 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC097721.1-201ENST00000427150 1253 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 FO393419.3-201ENST00000428741 282 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC108479.1-201ENST00000431142 427 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 MTND2P40-201ENST00000436718 841 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms