Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AP000676.2-201ENST00000529711 301 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 HSPE1P2-201ENST00000554777 306 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC027176.2-201ENST00000559166 746 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 OR1F2P-201ENST00000570470 933 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC012616.1-201ENST00000600294 197 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AL355802.4-201ENST00000607635 548 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AL159169.2-201ENST00000610061 1269 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC084824.5-201ENST00000612009 413 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC090607.5-201ENST00000615692 224 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC100827.5-201ENST00000615883 426 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AP002505.2-201ENST00000623585 696 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AP001153.1-201ENST00000641024 338 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AP001002.1-201ENST00000625148 1513 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 ZNF733P-202ENST00000444809 1573 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 RN7SKP103-201ENST00000363848 320 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 RPL23AP17-201ENST00000401064 499 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AL121977.1-201ENST00000401636 979 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC234781.4-201ENST00000419384 244 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AL590762.3-201ENST00000436372 640 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AP000949.1-201ENST00000438328 629 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC015983.1-201ENST00000441577 373 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC007000.2-201ENST00000442564 487 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 CBX1P2-201ENST00000453841 458 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 RN7SKP99-201ENST00000517028 307 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 HMGB1P46-201ENST00000520062 610 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 OR4R2P-201ENST00000530815 597 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 OR8G3P-201ENST00000533406 921 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC015849.2-201ENST00000605738 409 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC005021.1-201ENST00000608730 355 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 AC000068.2-201ENST00000608816 460 ntBASIC6.13□□□□□ -1.43
HERC6Q8IVU3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HERC6Q8IVU3 MFSD8-219ENST00000641228 2559 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 RNA5SP305-201ENST00000362665 119 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 RNU6-40P-201ENST00000384254 107 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 RNU1-106P-201ENST00000384382 164 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC006335.2-201ENST00000437993 330 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 Z80107.2-201ENST00000445127 392 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 CABYRP1-201ENST00000465493 1045 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 HMGB1P3-201ENST00000502802 616 ntBASIC6.12□□□□□ -1.43
HERC6Q8IVU3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.12□□□□□ -1.43
HERC6Q8IVU3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms