Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HMGB1P44-201ENST00000508597 572 ntBASIC4.94□□□□□ -1.62
VRK2Q86Y07 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 AP001804.2-201ENST00000533932 910 ntBASIC4.94□□□□□ -1.62
VRK2Q86Y07 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 MIR1273E-201ENST00000581165 102 ntBASIC4.94□□□□□ -1.62
VRK2Q86Y07 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 AC015982.1-201ENST00000608113 465 ntBASIC4.94□□□□□ -1.62
VRK2Q86Y07 AC087821.1-201ENST00000623639 567 ntBASIC4.94□□□□□ -1.62
VRK2Q86Y07 FRG1EP-201ENST00000634469 770 ntBASIC4.94□□□□□ -1.62
VRK2Q86Y07 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK2Q86Y07 STX3-208ENST00000641815 3236 ntBASIC4.94□□□□□ -1.62
VRK2Q86Y07 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK2Q86Y07 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK2Q86Y07 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK2Q86Y07 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VRK2Q86Y07 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VRK2Q86Y07 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK2Q86Y07 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 RNA5SP296-201ENST00000410523 111 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC124944.2-201ENST00000429866 1242 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 NFYAP1-201ENST00000431953 972 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 HMGB3P10-201ENST00000434734 572 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 HMGN1P36-201ENST00000446623 298 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 RANP1-206ENST00000455094 651 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC090638.1-201ENST00000498296 909 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC027369.5-201ENST00000533838 755 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 NMNAT1P5-201ENST00000559657 841 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC005341.1-201ENST00000571086 708 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC000068.2-201ENST00000608816 460 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 RN7SL787P-201ENST00000613000 284 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AL121890.2-201ENST00000617644 465 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC091932.2-201ENST00000623014 291 ntBASIC4.93□□□□□ -1.62
VRK2Q86Y07 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK2Q86Y07 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK2Q86Y07 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK2Q86Y07 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK2Q86Y07 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK2Q86Y07 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 SOCS5P3-201ENST00000425115 1576 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK2Q86Y07 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK2Q86Y07 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VRK2Q86Y07 MIR133B-201ENST00000362210 119 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 RNA5SP234-201ENST00000363916 119 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 SNORA48.4-201ENST00000391089 134 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 RPL12P9-201ENST00000412942 488 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 AC012075.1-201ENST00000436549 580 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 AC073909.1-201ENST00000447112 999 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 YWHAEP1-201ENST00000453697 763 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 RN7SL51P-201ENST00000468230 285 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 RPL7P41-201ENST00000485823 957 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 AC016559.2-201ENST00000510759 359 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 AC098976.1-201ENST00000513014 541 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK2Q86Y07 AL121839.1-201ENST00000556233 1185 ntBASIC4.92□□□□□ -1.62
VRK2Q86Y07 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms