Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCNA1P78396 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.09□□□□□ -1.43
CCNA1P78396 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.09□□□□□ -1.43
CCNA1P78396 AC011503.2-201ENST00000594230 1500 ntBASIC6.09□□□□□ -1.44
CCNA1P78396 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
CCNA1P78396 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.08□□□□□ -1.44
CCNA1P78396 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 SNORD56.6-201ENST00000384569 71 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 DBIP1-201ENST00000401435 260 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 AL445213.1-201ENST00000412589 747 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 AL360081.1-201ENST00000428299 555 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 TRY2P-201ENST00000448860 689 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.08□□□□□ -1.44
CCNA1P78396 CBX1P2-201ENST00000453841 458 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.08□□□□□ -1.44
CCNA1P78396 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CCNA1P78396 AC026782.2-201ENST00000510845 636 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 GAPDHP62-201ENST00000515313 990 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 RN7SKP67-201ENST00000515905 235 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.08□□□□□ -1.44
CCNA1P78396 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.08□□□□□ -1.44
CCNA1P78396 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.08□□□□□ -1.44
CCNA1P78396 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.08□□□□□ -1.44
CCNA1P78396 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.08□□□□□ -1.44
CCNA1P78396 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.08□□□□□ -1.44
CCNA1P78396 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.08□□□□□ -1.44
CCNA1P78396 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 AC135068.12-201ENST00000637370 931 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCNA1P78396 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 AC097063.1-201ENST00000426714 1797 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 AC012618.3-205ENST00000637896 1496 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCNA1P78396 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCNA1P78396 AC015799.1-201ENST00000622996 3122 ntBASIC6.08□□□□□ -1.44
CCNA1P78396 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 AC068870.3-201ENST00000625077 2536 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CCNA1P78396 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 SCARNA15-201ENST00000607520 4325 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.07□□□□□ -1.44
CCNA1P78396 CEACAMP9-201ENST00000442990 513 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 AC079168.1-201ENST00000458741 345 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 GYG1P1-201ENST00000460864 698 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.07□□□□□ -1.44
CCNA1P78396 AC091544.1-201ENST00000484702 348 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.07□□□□□ -1.44
CCNA1P78396 AC008126.1-201ENST00000549019 480 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.07□□□□□ -1.44
CCNA1P78396 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 NPM1P42-201ENST00000560329 862 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 AC060780.2-201ENST00000589047 198 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.07□□□□□ -1.44
CCNA1P78396 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 AP000769.2-201ENST00000602344 396 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 AC087783.2-201ENST00000605070 562 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.07□□□□□ -1.44
CCNA1P78396 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.07□□□□□ -1.44
CCNA1P78396 AC073869.7-201ENST00000640874 297 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 AL353796.1-201ENST00000561542 3241 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.07□□□□□ -1.44
CCNA1P78396 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.07□□□□□ -1.44
CCNA1P78396 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCNA1P78396 AC083843.2-201ENST00000568248 6253 ntBASIC6.07□□□□□ -1.44
CCNA1P78396 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.07□□□□□ -1.44
CCNA1P78396 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCNA1P78396 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.06□□□□□ -1.44
CCNA1P78396 CASC19-221ENST00000641309 1382 ntBASIC6.06□□□□□ -1.44
CCNA1P78396 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms