Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HMGB1P7-201ENST00000450921 612 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 SCARNA10-201ENST00000459255 330 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC004890.1-201ENST00000461005 181 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC026348.1-201ENST00000462549 1053 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC093270.2-201ENST00000486157 792 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS1BP61024 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 AC098976.1-201ENST00000513014 541 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC009879.1-201ENST00000520029 839 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 KCTD9P6-201ENST00000522306 950 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS1BP61024 AC036111.2-201ENST00000533247 901 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 OLR1-209ENST00000543993 822 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS1BP61024 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 AC139697.1-201ENST00000548429 745 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.8□□□□□ -1.8
CKS1BP61024 AGGF1P7-201ENST00000562369 913 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 MIR7853-201ENST00000584820 132 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 TAS2R6P-201ENST00000605022 826 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 NQO2-209ENST00000606474 470 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS1BP61024 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS1BP61024 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS1BP61024 AL135999.3-201ENST00000610501 812 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 AC012676.3-201ENST00000614983 479 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 AC037198.3-201ENST00000616754 526 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC245014.3-201ENST00000618589 347 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS1BP61024 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 OR11H2-202ENST00000641517 1085 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
CKS1BP61024 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS1BP61024 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS1BP61024 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS1BP61024 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS1BP61024 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS1BP61024 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS1BP61024 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CKS1BP61024 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CKS1BP61024 IL6STP1-201ENST00000346911 1020 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CKS1BP61024 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC013442.1-201ENST00000397347 228 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AL133260.1-201ENST00000405720 405 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 RN7SKP38-201ENST00000410782 309 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC009237.10-201ENST00000414112 510 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS1BP61024 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC3.79□□□□□ -1.8
CKS1BP61024 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CKS1BP61024 PCBP2P1-201ENST00000437262 977 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AL136455.1-201ENST00000441083 1240 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CKS1BP61024 AL356121.1-201ENST00000442911 156 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 HMGN1P16-201ENST00000508308 283 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 RNA5SP441-201ENST00000516809 88 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 RN7SKP5-201ENST00000517045 272 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC122688.1-201ENST00000541494 223 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC090515.3-201ENST00000560431 315 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 AC092332.1-201ENST00000563684 829 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS1BP61024 H3F3BP2-201ENST00000583907 357 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS1BP61024 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 SMIM12P1-201ENST00000603004 274 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 FAM27E4-201ENST00000605259 342 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS1BP61024 AL136131.3-201ENST00000607600 188 ntBASIC3.79□□□□□ -1.8
CKS1BP61024 SNORD91B-202ENST00000608459 222 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms