Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL035660.1-201ENST00000422041 222 ntBASIC4.63□□□□□ -1.67
ACTBP60709 CDY8P-201ENST00000428380 1279 ntBASIC4.63□□□□□ -1.67
ACTBP60709 AC124944.2-201ENST00000429866 1242 ntBASIC4.63□□□□□ -1.67
ACTBP60709 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.63□□□□□ -1.67
ACTBP60709 AL138899.2-201ENST00000439139 499 ntBASIC4.63□□□□□ -1.67
ACTBP60709 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.63□□□□□ -1.67
ACTBP60709 CDY20P-201ENST00000447528 1279 ntBASIC4.63□□□□□ -1.67
ACTBP60709 RN7SL583P-201ENST00000475692 287 ntBASIC4.63□□□□□ -1.67
ACTBP60709 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ACTBP60709 RPL21P6-201ENST00000479171 504 ntBASIC4.63□□□□□ -1.67
ACTBP60709 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.63□□□□□ -1.67
ACTBP60709 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.63□□□□□ -1.67
ACTBP60709 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.63□□□□□ -1.67
ACTBP60709 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 SCARNA6.1-201ENST00000516989 238 ntBASIC4.63□□□□□ -1.67
ACTBP60709 AC060775.1-201ENST00000518241 520 ntBASIC4.63□□□□□ -1.67
ACTBP60709 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.63□□□□□ -1.67
ACTBP60709 TRIM77BP-201ENST00000524985 1119 ntBASIC4.63□□□□□ -1.67
ACTBP60709 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.63□□□□□ -1.67
ACTBP60709 AC068305.2-201ENST00000550567 1205 ntBASIC4.63□□□□□ -1.67
ACTBP60709 AC092121.1-201ENST00000569452 202 ntBASIC4.63□□□□□ -1.67
ACTBP60709 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.63□□□□□ -1.67
ACTBP60709 AC022884.2-201ENST00000578535 580 ntBASIC4.63□□□□□ -1.67
ACTBP60709 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
ACTBP60709 AC244107.2-201ENST00000611773 76 ntBASIC4.63□□□□□ -1.67
ACTBP60709 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.63□□□□□ -1.67
ACTBP60709 MIR6839-201ENST00000620425 113 ntBASIC4.63□□□□□ -1.67
ACTBP60709 FO681491.1-202ENST00000623392 737 ntBASIC4.63□□□□□ -1.67
ACTBP60709 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 AL731532.2-201ENST00000623542 1953 ntBASIC4.63□□□□□ -1.67
ACTBP60709 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
ACTBP60709 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ACTBP60709 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ACTBP60709 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
ACTBP60709 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ACTBP60709 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
ACTBP60709 AC083843.3-201ENST00000623679 2186 ntBASIC4.63□□□□□ -1.67
ACTBP60709 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.62□□□□□ -1.67
ACTBP60709 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.62□□□□□ -1.67
ACTBP60709 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 AL450345.1-202ENST00000605741 3881 ntBASIC4.62□□□□□ -1.67
ACTBP60709 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.62□□□□□ -1.67
ACTBP60709 AC091305.2-201ENST00000624049 1576 ntBASIC4.62□□□□□ -1.67
ACTBP60709 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.62□□□□□ -1.67
ACTBP60709 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.62□□□□□ -1.67
ACTBP60709 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.62□□□□□ -1.67
ACTBP60709 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.62□□□□□ -1.67
ACTBP60709 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ACTBP60709 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 RN7SKP97-201ENST00000410966 333 ntBASIC4.62□□□□□ -1.67
ACTBP60709 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.62□□□□□ -1.67
ACTBP60709 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.62□□□□□ -1.67
ACTBP60709 BX323845.3-201ENST00000428215 527 ntBASIC4.62□□□□□ -1.67
ACTBP60709 AC046176.1-201ENST00000435260 1170 ntBASIC4.62□□□□□ -1.67
ACTBP60709 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.62□□□□□ -1.67
ACTBP60709 HLA-DPA3-207ENST00000454398 229 ntBASIC4.62□□□□□ -1.67
ACTBP60709 RNA5SP103-201ENST00000459503 118 ntBASIC4.62□□□□□ -1.67
ACTBP60709 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.62□□□□□ -1.67
ACTBP60709 AC009120.1-201ENST00000493458 473 ntBASIC4.62□□□□□ -1.67
ACTBP60709 PFN1P8-201ENST00000497012 543 ntBASIC4.62□□□□□ -1.67
ACTBP60709 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.62□□□□□ -1.67
ACTBP60709 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.62□□□□□ -1.67
ACTBP60709 RN7SKP34-201ENST00000516142 244 ntBASIC4.62□□□□□ -1.67
ACTBP60709 IGLV3-30-201ENST00000524362 298 ntBASIC4.62□□□□□ -1.67
ACTBP60709 AP000648.1-201ENST00000529682 397 ntBASIC4.62□□□□□ -1.67
ACTBP60709 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ACTBP60709 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
ACTBP60709 AC233702.9-201ENST00000581528 203 ntBASIC4.62□□□□□ -1.67
ACTBP60709 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.62□□□□□ -1.67
ACTBP60709 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.62□□□□□ -1.67
ACTBP60709 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.62□□□□□ -1.67
ACTBP60709 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.62□□□□□ -1.67
ACTBP60709 AL031601.1-201ENST00000605702 394 ntBASIC4.62□□□□□ -1.67
ACTBP60709 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.62□□□□□ -1.67
ACTBP60709 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.62□□□□□ -1.67
ACTBP60709 OR8G3P-202ENST00000641572 1255 ntBASIC4.62□□□□□ -1.67
ACTBP60709 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 MAPK10-320ENST00000641462 6696 ntBASIC4.62□□□□□ -1.67
ACTBP60709 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 NEPNP-201ENST00000404786 1371 ntBASIC4.62□□□□□ -1.67
ACTBP60709 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.62□□□□□ -1.67
ACTBP60709 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms