Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HDAC4P56524 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HDAC4P56524 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 RN7SKP69-201ENST00000365390 305 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.85□□□□□ -1.47
HDAC4P56524 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.85□□□□□ -1.47
HDAC4P56524 SNORA5.1-201ENST00000384275 131 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 RNA5SP284-201ENST00000384547 118 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 RMRPP5-201ENST00000411156 267 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.85□□□□□ -1.47
HDAC4P56524 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.85□□□□□ -1.47
HDAC4P56524 NPM1P26-201ENST00000426339 738 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 BX119321.1-201ENST00000428912 797 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 RPL23AP19-201ENST00000436229 369 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.85□□□□□ -1.47
HDAC4P56524 SNORD125-201ENST00000459538 96 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.85□□□□□ -1.47
HDAC4P56524 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.85□□□□□ -1.47
HDAC4P56524 COX6B1P2-201ENST00000489624 230 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.85□□□□□ -1.47
HDAC4P56524 MTND3P3-201ENST00000505004 126 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.85□□□□□ -1.47
HDAC4P56524 CYCSP22-201ENST00000517555 339 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.85□□□□□ -1.47
HDAC4P56524 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.85□□□□□ -1.47
HDAC4P56524 AC074029.2-201ENST00000551045 634 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AL390334.1-201ENST00000556395 450 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.85□□□□□ -1.47
HDAC4P56524 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 LINC00557-201ENST00000563184 1279 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AC010503.3-201ENST00000594355 540 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AC018809.2-201ENST00000602436 3823 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.85□□□□□ -1.47
HDAC4P56524 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HDAC4P56524 AL390318.1-201ENST00000624564 687 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AC080188.3-201ENST00000624842 748 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDAC4P56524 AC114774.1-201ENST00000507410 1770 ntBASIC5.85□□□□□ -1.47
HDAC4P56524 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HDAC4P56524 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 AC006206.1-201ENST00000544842 3387 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HDAC4P56524 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HDAC4P56524 OR4F13P-202ENST00000560066 2054 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HDAC4P56524 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 RARSP1-201ENST00000542842 1418 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.84□□□□□ -1.47
HDAC4P56524 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HDAC4P56524 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HDAC4P56524 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.84□□□□□ -1.47
HDAC4P56524 RNA5SP510-201ENST00000364697 99 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 AMZ2P2-201ENST00000406819 1057 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 AL158827.1-201ENST00000416300 391 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 AC113412.1-201ENST00000425840 504 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 MRPS33P4-201ENST00000434892 317 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 TXNP2-201ENST00000443918 295 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 LRRC37A14P-201ENST00000452297 462 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 AC105918.1-201ENST00000474399 838 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.84□□□□□ -1.47
HDAC4P56524 ATP5LP5-201ENST00000483050 299 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.84□□□□□ -1.47
HDAC4P56524 GLUD1P3-202ENST00000508551 200 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 PMS2P3-207ENST00000529061 717 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 AC122688.1-201ENST00000541494 223 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 AC051619.2-201ENST00000559063 397 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.84□□□□□ -1.47
HDAC4P56524 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.84□□□□□ -1.47
HDAC4P56524 AC144521.1-201ENST00000607148 956 ntBASIC5.84□□□□□ -1.47
HDAC4P56524 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 1293.1 ms