Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR1286-201ENST00000408112 78 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 SLC35E1P1-201ENST00000419313 864 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.99□□□□□ -1.61
LIM2P55344 AC108075.1-201ENST00000424692 529 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.99□□□□□ -1.61
LIM2P55344 NOP56P2-201ENST00000447491 769 ntBASIC4.99□□□□□ -1.61
LIM2P55344 PRPF38AP1-201ENST00000451976 933 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AL606490.1-201ENST00000452266 765 ntBASIC4.99□□□□□ -1.61
LIM2P55344 DNAJB5P1-201ENST00000454004 806 ntBASIC4.99□□□□□ -1.61
LIM2P55344 OR2AF1P-201ENST00000454899 889 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AC135999.1-201ENST00000478962 479 ntBASIC4.99□□□□□ -1.61
LIM2P55344 RPL7P41-201ENST00000485823 957 ntBASIC4.99□□□□□ -1.61
LIM2P55344 RPS21P4-201ENST00000487122 248 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 NPM1P28-201ENST00000492269 840 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AC015864.1-201ENST00000496512 544 ntBASIC4.99□□□□□ -1.61
LIM2P55344 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.99□□□□□ -1.61
LIM2P55344 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIM2P55344 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.99□□□□□ -1.61
LIM2P55344 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 AC010503.3-201ENST00000594355 540 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.99□□□□□ -1.61
LIM2P55344 AC009597.2-201ENST00000604659 592 ntBASIC4.99□□□□□ -1.61
LIM2P55344 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.99□□□□□ -1.61
LIM2P55344 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.99□□□□□ -1.61
LIM2P55344 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIM2P55344 AC073136.1-201ENST00000449426 2884 ntBASIC4.99□□□□□ -1.61
LIM2P55344 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIM2P55344 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIM2P55344 CASC19-255ENST00000641733 1385 ntBASIC4.99□□□□□ -1.61
LIM2P55344 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIM2P55344 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.99□□□□□ -1.61
LIM2P55344 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIM2P55344 AC130360.2-201ENST00000533477 1556 ntBASIC4.99□□□□□ -1.61
LIM2P55344 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIM2P55344 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.98□□□□□ -1.61
LIM2P55344 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 AL358178.1-201ENST00000407698 397 ntBASIC4.98□□□□□ -1.61
LIM2P55344 RN7SKP229-201ENST00000410465 302 ntBASIC4.98□□□□□ -1.61
LIM2P55344 RPL12P9-201ENST00000412942 488 ntBASIC4.98□□□□□ -1.61
LIM2P55344 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.98□□□□□ -1.61
LIM2P55344 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.98□□□□□ -1.61
LIM2P55344 CLUHP1-201ENST00000435012 1190 ntBASIC4.98□□□□□ -1.61
LIM2P55344 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 RPS26P39-201ENST00000469206 341 ntBASIC4.98□□□□□ -1.61
LIM2P55344 COPS8P2-201ENST00000473228 627 ntBASIC4.98□□□□□ -1.61
LIM2P55344 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.98□□□□□ -1.61
LIM2P55344 AC091917.2-201ENST00000505002 744 ntBASIC4.98□□□□□ -1.61
LIM2P55344 RPS4XP20-201ENST00000505751 772 ntBASIC4.98□□□□□ -1.61
LIM2P55344 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.98□□□□□ -1.61
LIM2P55344 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 AC011411.1-201ENST00000509592 876 ntBASIC4.98□□□□□ -1.61
LIM2P55344 EIF3KP3-201ENST00000514461 639 ntBASIC4.98□□□□□ -1.61
LIM2P55344 RNU6-943P-201ENST00000516960 98 ntBASIC4.98□□□□□ -1.61
LIM2P55344 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.98□□□□□ -1.61
LIM2P55344 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.98□□□□□ -1.61
LIM2P55344 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.98□□□□□ -1.61
LIM2P55344 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.98□□□□□ -1.61
LIM2P55344 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.98□□□□□ -1.61
LIM2P55344 AC040958.1-201ENST00000561102 201 ntBASIC4.98□□□□□ -1.61
LIM2P55344 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
LIM2P55344 RN7SL753P-201ENST00000581238 290 ntBASIC4.98□□□□□ -1.61
LIM2P55344 PRPF19P1-201ENST00000584766 898 ntBASIC4.98□□□□□ -1.61
LIM2P55344 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 AL512329.2-201ENST00000607350 548 ntBASIC4.98□□□□□ -1.61
LIM2P55344 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 AL157762.1-201ENST00000619612 415 ntBASIC4.98□□□□□ -1.61
LIM2P55344 AC008115.4-201ENST00000619780 775 ntBASIC4.98□□□□□ -1.61
LIM2P55344 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.98□□□□□ -1.61
LIM2P55344 AL353684.1-201ENST00000622677 1120 ntBASIC4.98□□□□□ -1.61
LIM2P55344 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 AC092747.4-201ENST00000620519 1861 ntBASIC4.98□□□□□ -1.61
LIM2P55344 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIM2P55344 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.98□□□□□ -1.61
LIM2P55344 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 AC011493.1-201ENST00000596753 1632 ntBASIC4.97□□□□□ -1.61
LIM2P55344 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 AC018628.1-201ENST00000624147 3819 ntBASIC4.97□□□□□ -1.61
LIM2P55344 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms