Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL645931.1-201ENST00000439737 410 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.11□□□□□ -1.43
NEK3P51956 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.11□□□□□ -1.43
NEK3P51956 AC016027.4-201ENST00000450866 277 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 AC016724.1-201ENST00000453215 421 ntBASIC6.11□□□□□ -1.43
NEK3P51956 HLA-DPA3-207ENST00000454398 229 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 ACA64.1-201ENST00000459171 127 ntBASIC6.11□□□□□ -1.43
NEK3P51956 RPL7P48-201ENST00000461513 746 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 AC111193.1-201ENST00000504097 155 ntBASIC6.11□□□□□ -1.43
NEK3P51956 RPS27AP18-201ENST00000515536 459 ntBASIC6.11□□□□□ -1.43
NEK3P51956 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.11□□□□□ -1.43
NEK3P51956 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 IGKV2D-10-201ENST00000520194 281 ntBASIC6.11□□□□□ -1.43
NEK3P51956 TPM3P3-201ENST00000521343 354 ntBASIC6.11□□□□□ -1.43
NEK3P51956 NANOGNBP2-201ENST00000544753 553 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.11□□□□□ -1.43
NEK3P51956 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.11□□□□□ -1.43
NEK3P51956 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 AC022884.3-201ENST00000579571 248 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.11□□□□□ -1.43
NEK3P51956 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NEK3P51956 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NEK3P51956 AC016583.1-201ENST00000624221 2431 ntBASIC6.11□□□□□ -1.43
NEK3P51956 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NEK3P51956 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NEK3P51956 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEK3P51956 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.1□□□□□ -1.43
NEK3P51956 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 GNL2P1-201ENST00000451274 2190 ntBASIC6.1□□□□□ -1.43
NEK3P51956 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 AL161756.3-201ENST00000641216 2071 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AC010329.2-201ENST00000595195 2737 ntBASIC6.1□□□□□ -1.43
NEK3P51956 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 RNU105B-201ENST00000364478 208 ntBASIC6.1□□□□□ -1.43
NEK3P51956 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEK3P51956 RPL22P22-201ENST00000395439 379 ntBASIC6.1□□□□□ -1.43
NEK3P51956 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NEK3P51956 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 TCEA1P4-201ENST00000415066 844 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AL354868.1-201ENST00000417077 482 ntBASIC6.1□□□□□ -1.43
NEK3P51956 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 IPPKP1-201ENST00000422501 768 ntBASIC6.1□□□□□ -1.43
NEK3P51956 MRPS21P2-201ENST00000424704 264 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AL512593.1-201ENST00000444758 779 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AL445466.1-201ENST00000448432 357 ntBASIC6.1□□□□□ -1.43
NEK3P51956 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AC084754.1-201ENST00000463466 464 ntBASIC6.1□□□□□ -1.43
NEK3P51956 RPL21P6-201ENST00000479171 504 ntBASIC6.1□□□□□ -1.43
NEK3P51956 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
NEK3P51956 RN7SL284P-201ENST00000498823 275 ntBASIC6.1□□□□□ -1.43
NEK3P51956 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.1□□□□□ -1.43
NEK3P51956 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.1□□□□□ -1.43
NEK3P51956 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AC108471.1-201ENST00000513977 287 ntBASIC6.1□□□□□ -1.43
NEK3P51956 snoU109.5-201ENST00000516231 132 ntBASIC6.1□□□□□ -1.43
NEK3P51956 SCARNA1-201ENST00000517138 166 ntBASIC6.1□□□□□ -1.43
NEK3P51956 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AC136777.2-201ENST00000522979 358 ntBASIC6.1□□□□□ -1.43
NEK3P51956 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEK3P51956 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.1□□□□□ -1.43
NEK3P51956 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.1□□□□□ -1.43
NEK3P51956 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AC005244.1-201ENST00000582566 339 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.1□□□□□ -1.43
NEK3P51956 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.1□□□□□ -1.43
NEK3P51956 AC096861.1-201ENST00000616652 240 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms