Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC090018.1-201ENST00000434369 367 ntBASIC9□□□□□ -0.97
SMARCA4P51532 RN7SL441P-201ENST00000492388 296 ntBASIC9□□□□□ -0.97
SMARCA4P51532 AK3P4-201ENST00000504283 583 ntBASIC9□□□□□ -0.97
SMARCA4P51532 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC9□□□□□ -0.97
SMARCA4P51532 OR8G5-201ENST00000524943 1041 ntBASIC9□□□□□ -0.97
SMARCA4P51532 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC9□□□□□ -0.97
SMARCA4P51532 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC9□□□□□ -0.97
SMARCA4P51532 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SMARCA4P51532 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 AC010401.2-201ENST00000575137 4934 ntBASIC8.99□□□□□ -0.97
SMARCA4P51532 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SMARCA4P51532 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
SMARCA4P51532 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC8.99□□□□□ -0.97
SMARCA4P51532 TTC3P1-201ENST00000399586 6081 ntBASIC8.99□□□□□ -0.97
SMARCA4P51532 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.99□□□□□ -0.97
SMARCA4P51532 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.99□□□□□ -0.97
SMARCA4P51532 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
SMARCA4P51532 RNU4-39P-201ENST00000362455 127 ntBASIC8.99□□□□□ -0.97
SMARCA4P51532 SNORD113.2-201ENST00000364166 89 ntBASIC8.99□□□□□ -0.97
SMARCA4P51532 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.99□□□□□ -0.97
SMARCA4P51532 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SMARCA4P51532 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.99□□□□□ -0.97
SMARCA4P51532 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.99□□□□□ -0.97
SMARCA4P51532 AC093824.1-201ENST00000508796 343 ntBASIC8.99□□□□□ -0.97
SMARCA4P51532 RN7SKP92-201ENST00000517266 244 ntBASIC8.99□□□□□ -0.97
SMARCA4P51532 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.99□□□□□ -0.97
SMARCA4P51532 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SMARCA4P51532 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
SMARCA4P51532 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.99□□□□□ -0.97
SMARCA4P51532 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
SMARCA4P51532 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
SMARCA4P51532 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
SMARCA4P51532 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
SMARCA4P51532 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.99□□□□□ -0.97
SMARCA4P51532 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.98□□□□□ -0.97
SMARCA4P51532 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
SMARCA4P51532 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.98□□□□□ -0.97
SMARCA4P51532 RPL7AP61-201ENST00000443410 636 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 PPIAP21-201ENST00000464473 501 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.98□□□□□ -0.97
SMARCA4P51532 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.98□□□□□ -0.97
SMARCA4P51532 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.98□□□□□ -0.97
SMARCA4P51532 AL596275.2-208ENST00000641192 594 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.98□□□□□ -0.97
SMARCA4P51532 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
SMARCA4P51532 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SMARCA4P51532 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.98□□□□□ -0.97
SMARCA4P51532 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC8.98□□□□□ -0.97
SMARCA4P51532 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.98□□□□□ -0.97
SMARCA4P51532 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 MIR1193-201ENST00000408109 78 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 CENPIP1-201ENST00000425713 902 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 AC239367.2-201ENST00000447309 705 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 AC138701.1-201ENST00000524329 714 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 KPNA2P3-201ENST00000584190 848 ntBASIC8.98□□□□□ -0.97
SMARCA4P51532 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.98□□□□□ -0.97
SMARCA4P51532 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.98□□□□□ -0.97
SMARCA4P51532 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.98□□□□□ -0.97
SMARCA4P51532 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SMARCA4P51532 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.97□□□□□ -0.97
SMARCA4P51532 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 NCLP2-201ENST00000416078 1462 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SMARCA4P51532 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.97□□□□□ -0.97
SMARCA4P51532 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SMARCA4P51532 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
SMARCA4P51532 SNORA57.1-201ENST00000391227 145 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 RNA5SP397-201ENST00000391323 118 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 MIR298-201ENST00000401212 88 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 RNA5SP345-201ENST00000410646 108 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 OR51B3P-201ENST00000412287 913 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.97□□□□□ -0.97
SMARCA4P51532 AC022360.1-201ENST00000521058 340 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC8.97□□□□□ -0.97
SMARCA4P51532 AC084824.2-201ENST00000548906 345 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 AC069366.1-201ENST00000583159 838 ntBASIC8.97□□□□□ -0.97
SMARCA4P51532 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SMARCA4P51532 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms