Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CBX1P2-201ENST00000453841 458 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.85□□□□□ -1.31
MRE11P49959 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 AC025458.1-201ENST00000506046 166 ntBASIC6.85□□□□□ -1.31
MRE11P49959 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
MRE11P49959 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 SNORA76.2-201ENST00000517095 137 ntBASIC6.85□□□□□ -1.31
MRE11P49959 CDH12P4-201ENST00000517835 295 ntBASIC6.85□□□□□ -1.31
MRE11P49959 CDH12P3-201ENST00000517935 295 ntBASIC6.85□□□□□ -1.31
MRE11P49959 CDH12P1-201ENST00000518435 295 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AP003355.1-201ENST00000518956 587 ntBASIC6.85□□□□□ -1.31
MRE11P49959 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.85□□□□□ -1.31
MRE11P49959 NPM1P35-201ENST00000533043 868 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 MRPS36P5-201ENST00000551909 298 ntBASIC6.85□□□□□ -1.31
MRE11P49959 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.85□□□□□ -1.31
MRE11P49959 AC106730.2-201ENST00000566641 540 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.85□□□□□ -1.31
MRE11P49959 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.85□□□□□ -1.31
MRE11P49959 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 AP001160.4-201ENST00000596971 382 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AC008751.2-201ENST00000597885 980 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 AC069431.2-201ENST00000604149 1099 ntBASIC6.85□□□□□ -1.31
MRE11P49959 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.85□□□□□ -1.31
MRE11P49959 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 AL162574.1-201ENST00000615702 950 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AL590410.1-201ENST00000617925 333 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AC073488.6-201ENST00000632293 754 ntBASIC6.85□□□□□ -1.31
MRE11P49959 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
MRE11P49959 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.84□□□□□ -1.31
MRE11P49959 AC011933.2-201ENST00000578539 2790 ntBASIC6.84□□□□□ -1.31
MRE11P49959 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 RPL11P4-201ENST00000332269 436 ntBASIC6.84□□□□□ -1.31
MRE11P49959 RN7SKP103-201ENST00000363848 320 ntBASIC6.84□□□□□ -1.31
MRE11P49959 RNU6-650P-201ENST00000365658 111 ntBASIC6.84□□□□□ -1.31
MRE11P49959 MRPS6P2-201ENST00000381143 370 ntBASIC6.84□□□□□ -1.31
MRE11P49959 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 AL121878.1-201ENST00000418638 859 ntBASIC6.84□□□□□ -1.31
MRE11P49959 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 AC093166.2-201ENST00000455969 1017 ntBASIC6.84□□□□□ -1.31
MRE11P49959 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 RPSAP39-201ENST00000467439 883 ntBASIC6.84□□□□□ -1.31
MRE11P49959 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MRE11P49959 RN7SL799P-201ENST00000475891 298 ntBASIC6.84□□□□□ -1.31
MRE11P49959 RN7SL714P-201ENST00000487050 298 ntBASIC6.84□□□□□ -1.31
MRE11P49959 AC112184.1-201ENST00000505179 312 ntBASIC6.84□□□□□ -1.31
MRE11P49959 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 AC021451.1-201ENST00000523498 1129 ntBASIC6.84□□□□□ -1.31
MRE11P49959 AC092865.1-201ENST00000544395 1023 ntBASIC6.84□□□□□ -1.31
MRE11P49959 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 AL109741.3-201ENST00000561748 592 ntBASIC6.84□□□□□ -1.31
MRE11P49959 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.84□□□□□ -1.31
MRE11P49959 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.84□□□□□ -1.31
MRE11P49959 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.84□□□□□ -1.31
MRE11P49959 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.84□□□□□ -1.31
MRE11P49959 FAM60CP-201ENST00000591086 664 ntBASIC6.84□□□□□ -1.31
MRE11P49959 AL513327.3-201ENST00000602618 469 ntBASIC6.84□□□□□ -1.31
MRE11P49959 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.84□□□□□ -1.31
MRE11P49959 AC100847.1-201ENST00000611316 481 ntBASIC6.84□□□□□ -1.31
MRE11P49959 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.84□□□□□ -1.31
MRE11P49959 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MRE11P49959 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
MRE11P49959 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MRE11P49959 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MRE11P49959 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.84□□□□□ -1.31
MRE11P49959 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.84□□□□□ -1.32
MRE11P49959 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
MRE11P49959 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.84□□□□□ -1.32
MRE11P49959 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
MRE11P49959 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.83□□□□□ -1.32
MRE11P49959 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
MRE11P49959 U3.7-201ENST00000363668 216 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 332 ms