Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CR1P49238 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CR1P49238 RN7SKP292-201ENST00000365522 317 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 SNORA16A-201ENST00000384342 137 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 RNU6-1263P-201ENST00000384601 106 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 CTSL3P-202ENST00000412179 788 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 BMS1P17-202ENST00000416720 316 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CR1P49238 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CR1P49238 RPL36AP39-201ENST00000445859 318 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC090804.1-201ENST00000448870 490 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 MTND6P32-201ENST00000457611 483 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC084754.1-201ENST00000463466 464 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC007998.1-201ENST00000474156 672 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 RPS12P31-201ENST00000491419 398 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 PSMA2P2-201ENST00000504319 686 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CR1P49238 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CR1P49238 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CR1P49238 AC112191.2-201ENST00000522428 333 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC022616.2-201ENST00000523185 300 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.7□□□□□ -1.66
CX3CR1P49238 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CR1P49238 AC040958.1-201ENST00000561102 201 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CR1P49238 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CR1P49238 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 AL359742.1-201ENST00000622497 540 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 CU639417.4-201ENST00000623928 207 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CX3CR1P49238 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
CX3CR1P49238 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 AC022417.1-201ENST00000624768 1303 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CR1P49238 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CX3CR1P49238 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CR1P49238 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 THAP12P8-201ENST00000447914 2115 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CX3CR1P49238 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 OR9G4-201ENST00000302957 984 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 NPM1P40-201ENST00000412758 733 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 COX5BP7-201ENST00000414780 274 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 MTCO1P51-201ENST00000427672 1060 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CR1P49238 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CR1P49238 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.69□□□□□ -1.66
CX3CR1P49238 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 AC021660.1-201ENST00000465006 554 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 AC022133.1-201ENST00000490961 571 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 RPS24P16-201ENST00000497294 392 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CR1P49238 HMGB1P44-201ENST00000508597 572 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 IMPA1P1-201ENST00000510718 842 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 AC022826.1-201ENST00000519383 805 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CR1P49238 AP004607.2-201ENST00000533949 322 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 AC078878.1-201ENST00000539832 958 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CR1P49238 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 AC005341.1-201ENST00000571086 708 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 MIR4505-201ENST00000582238 73 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CR1P49238 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 AP003400.3-201ENST00000624904 346 ntBASIC4.69□□□□□ -1.66
CX3CR1P49238 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CR1P49238 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CR1P49238 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CR1P49238 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CR1P49238 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CX3CR1P49238 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CX3CR1P49238 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CX3CR1P49238 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CX3CR1P49238 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms