Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ICE2P1-201ENST00000512800 1849 ntBASIC5.66□□□□□ -1.5
LHX1P48742 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.66□□□□□ -1.5
LHX1P48742 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.66□□□□□ -1.5
LHX1P48742 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LHX1P48742 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.66□□□□□ -1.5
LHX1P48742 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 AC005261.2-201ENST00000593427 4258 ntBASIC5.65□□□□□ -1.5
LHX1P48742 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LHX1P48742 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LHX1P48742 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LHX1P48742 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.65□□□□□ -1.5
LHX1P48742 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LHX1P48742 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LHX1P48742 SNORA17.1-201ENST00000362945 126 ntBASIC5.65□□□□□ -1.5
LHX1P48742 RNU1-19P-201ENST00000363306 165 ntBASIC5.65□□□□□ -1.5
LHX1P48742 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LHX1P48742 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LHX1P48742 DUTP5-201ENST00000406790 469 ntBASIC5.65□□□□□ -1.5
LHX1P48742 RN7SKP278-201ENST00000410504 342 ntBASIC5.65□□□□□ -1.5
LHX1P48742 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.65□□□□□ -1.5
LHX1P48742 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.65□□□□□ -1.5
LHX1P48742 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LHX1P48742 AC017019.1-201ENST00000426129 261 ntBASIC5.65□□□□□ -1.5
LHX1P48742 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.65□□□□□ -1.5
LHX1P48742 AC005033.1-201ENST00000428904 813 ntBASIC5.65□□□□□ -1.5
LHX1P48742 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.65□□□□□ -1.5
LHX1P48742 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.65□□□□□ -1.5
LHX1P48742 EEF1B2P5-201ENST00000444820 548 ntBASIC5.65□□□□□ -1.5
LHX1P48742 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.65□□□□□ -1.5
LHX1P48742 AURKAPS1-201ENST00000451805 1212 ntBASIC5.65□□□□□ -1.5
LHX1P48742 AC005532.2-201ENST00000467154 373 ntBASIC5.65□□□□□ -1.5
LHX1P48742 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.65□□□□□ -1.5
LHX1P48742 AC022133.1-201ENST00000490961 571 ntBASIC5.65□□□□□ -1.5
LHX1P48742 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LHX1P48742 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.65□□□□□ -1.5
LHX1P48742 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.65□□□□□ -1.5
LHX1P48742 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LHX1P48742 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.65□□□□□ -1.5
LHX1P48742 AC016769.4-201ENST00000616893 535 ntBASIC5.65□□□□□ -1.5
LHX1P48742 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.65□□□□□ -1.5
LHX1P48742 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.65□□□□□ -1.5
LHX1P48742 AC099654.6-201ENST00000636487 512 ntBASIC5.65□□□□□ -1.5
LHX1P48742 AP000550.3-201ENST00000637734 379 ntBASIC5.65□□□□□ -1.5
LHX1P48742 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.65□□□□□ -1.5
LHX1P48742 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.65□□□□□ -1.5
LHX1P48742 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LHX1P48742 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.65□□□□□ -1.51
LHX1P48742 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.65□□□□□ -1.51
LHX1P48742 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.65□□□□□ -1.51
LHX1P48742 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.65□□□□□ -1.51
LHX1P48742 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
LHX1P48742 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LHX1P48742 ABCC13-202ENST00000463099 3842 ntBASIC5.65□□□□□ -1.51
LHX1P48742 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LHX1P48742 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.65□□□□□ -1.51
LHX1P48742 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LHX1P48742 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
LHX1P48742 CR382285.2-201ENST00000624662 1495 ntBASIC5.64□□□□□ -1.51
LHX1P48742 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 AC003973.3-201ENST00000624863 2822 ntBASIC5.64□□□□□ -1.51
LHX1P48742 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LHX1P48742 RNU6-386P-201ENST00000362650 107 ntBASIC5.64□□□□□ -1.51
LHX1P48742 RNU6-1331P-201ENST00000363658 106 ntBASIC5.64□□□□□ -1.51
LHX1P48742 RNU1-146P-201ENST00000364015 165 ntBASIC5.64□□□□□ -1.51
LHX1P48742 DHFRP5-201ENST00000406944 564 ntBASIC5.64□□□□□ -1.51
LHX1P48742 SPTLC1P2-201ENST00000407089 121 ntBASIC5.64□□□□□ -1.51
LHX1P48742 RN7SKP273-201ENST00000411392 314 ntBASIC5.64□□□□□ -1.51
LHX1P48742 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.64□□□□□ -1.51
LHX1P48742 AC009963.4-201ENST00000448535 339 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AL356390.1-201ENST00000455684 397 ntBASIC5.64□□□□□ -1.51
LHX1P48742 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.64□□□□□ -1.51
LHX1P48742 RPL15P21-201ENST00000495592 567 ntBASIC5.64□□□□□ -1.51
LHX1P48742 RPS26P24-201ENST00000497656 331 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.64□□□□□ -1.51
LHX1P48742 GTF2F2P1-201ENST00000511083 675 ntBASIC5.64□□□□□ -1.51
LHX1P48742 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.64□□□□□ -1.51
LHX1P48742 HMGN1P9-201ENST00000515212 298 ntBASIC5.64□□□□□ -1.51
LHX1P48742 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.64□□□□□ -1.51
LHX1P48742 AC027308.1-201ENST00000517993 110 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AC012400.1-201ENST00000518452 381 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.64□□□□□ -1.51
LHX1P48742 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.64□□□□□ -1.51
LHX1P48742 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
LHX1P48742 AC026616.1-201ENST00000523157 525 ntBASIC5.64□□□□□ -1.51
LHX1P48742 OR4A43P-201ENST00000532938 908 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AC024940.3-201ENST00000538551 316 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AC127381.1-201ENST00000555979 939 ntBASIC5.64□□□□□ -1.51
LHX1P48742 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
LHX1P48742 AC067805.1-201ENST00000559344 470 ntBASIC5.64□□□□□ -1.51
LHX1P48742 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.64□□□□□ -1.51
LHX1P48742 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms