Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DYNLL1P4-201ENST00000549314 266 ntBASIC5.79□□□□□ -1.48
SSR1P43307 IGBP1P1-201ENST00000554337 1009 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.79□□□□□ -1.48
SSR1P43307 MRPS21P7-201ENST00000566937 238 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AL359715.3-201ENST00000569267 2123 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 AC025574.2-201ENST00000615621 514 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.79□□□□□ -1.48
SSR1P43307 MIR193BHG-214ENST00000641765 509 ntBASIC5.79□□□□□ -1.48
SSR1P43307 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
SSR1P43307 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.79□□□□□ -1.48
SSR1P43307 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 AL450345.1-202ENST00000605741 3881 ntBASIC5.79□□□□□ -1.48
SSR1P43307 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSR1P43307 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AL731566.1-201ENST00000620490 1937 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.78□□□□□ -1.48
SSR1P43307 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSR1P43307 MIR551A-201ENST00000385042 96 ntBASIC5.78□□□□□ -1.48
SSR1P43307 RNU6-233P-201ENST00000410845 141 ntBASIC5.78□□□□□ -1.48
SSR1P43307 HMGN1P20-201ENST00000411849 300 ntBASIC5.78□□□□□ -1.48
SSR1P43307 RPS3P2-201ENST00000421346 701 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AC106901.1-201ENST00000425086 698 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AL662874.1-201ENST00000426065 230 ntBASIC5.78□□□□□ -1.48
SSR1P43307 BX119321.1-201ENST00000428912 797 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.78□□□□□ -1.48
SSR1P43307 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.78□□□□□ -1.48
SSR1P43307 HMGN1P2-201ENST00000445197 310 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AL450996.1-201ENST00000445574 1202 ntBASIC5.78□□□□□ -1.48
SSR1P43307 LRRC37A14P-201ENST00000452297 462 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AC022795.1-201ENST00000473808 480 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.78□□□□□ -1.48
SSR1P43307 RN7SKP99-201ENST00000517028 307 ntBASIC5.78□□□□□ -1.48
SSR1P43307 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.78□□□□□ -1.48
SSR1P43307 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.78□□□□□ -1.48
SSR1P43307 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.78□□□□□ -1.48
SSR1P43307 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.78□□□□□ -1.48
SSR1P43307 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 AC091046.3-201ENST00000631455 1574 ntBASIC5.78□□□□□ -1.48
SSR1P43307 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
SSR1P43307 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSR1P43307 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.78□□□□□ -1.48
SSR1P43307 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
SSR1P43307 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SSR1P43307 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSR1P43307 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSR1P43307 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SSR1P43307 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSR1P43307 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.77□□□□□ -1.49
SSR1P43307 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSR1P43307 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSR1P43307 RNA5SP131-201ENST00000365452 119 ntBASIC5.77□□□□□ -1.49
SSR1P43307 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSR1P43307 AC019155.1-201ENST00000382242 574 ntBASIC5.77□□□□□ -1.49
SSR1P43307 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSR1P43307 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.77□□□□□ -1.49
SSR1P43307 IPPKP1-201ENST00000422501 768 ntBASIC5.77□□□□□ -1.49
SSR1P43307 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 AL445665.1-202ENST00000452436 324 ntBASIC5.77□□□□□ -1.49
SSR1P43307 AL358876.1-201ENST00000453364 1075 ntBASIC5.77□□□□□ -1.49
SSR1P43307 AC114982.2-201ENST00000461396 358 ntBASIC5.77□□□□□ -1.49
SSR1P43307 ENPP7P11-201ENST00000505915 627 ntBASIC5.77□□□□□ -1.49
SSR1P43307 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.77□□□□□ -1.49
SSR1P43307 RNA5SP228-201ENST00000516232 133 ntBASIC5.77□□□□□ -1.49
SSR1P43307 CYCSP22-201ENST00000517555 339 ntBASIC5.77□□□□□ -1.49
SSR1P43307 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.77□□□□□ -1.49
SSR1P43307 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.77□□□□□ -1.49
SSR1P43307 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.77□□□□□ -1.49
SSR1P43307 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.77□□□□□ -1.49
SSR1P43307 RBM22P12-201ENST00000567098 1255 ntBASIC5.77□□□□□ -1.49
SSR1P43307 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.77□□□□□ -1.49
SSR1P43307 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.77□□□□□ -1.49
SSR1P43307 AP005119.2-201ENST00000579735 1105 ntBASIC5.77□□□□□ -1.49
SSR1P43307 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.77□□□□□ -1.49
SSR1P43307 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSR1P43307 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.77□□□□□ -1.49
SSR1P43307 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SSR1P43307 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SSR1P43307 YES1P1-201ENST00000418510 1628 ntBASIC5.77□□□□□ -1.49
SSR1P43307 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms