Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 OR8A2P-201ENST00000528631 952 ntBASIC5.44□□□□□ -1.54
HTTP42858 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 AC011626.1-201ENST00000604710 562 ntBASIC5.44□□□□□ -1.54
HTTP42858 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.44□□□□□ -1.54
HTTP42858 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 TCP11X1-202ENST00000622971 1372 ntBASIC5.44□□□□□ -1.54
HTTP42858 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.44□□□□□ -1.54
HTTP42858 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HTTP42858 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.43□□□□□ -1.54
HTTP42858 TRAV35-201ENST00000390462 330 ntBASIC5.43□□□□□ -1.54
HTTP42858 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.43□□□□□ -1.54
HTTP42858 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.43□□□□□ -1.54
HTTP42858 AL133372.1-201ENST00000493565 745 ntBASIC5.43□□□□□ -1.54
HTTP42858 AC084783.1-201ENST00000565846 910 ntBASIC5.43□□□□□ -1.54
HTTP42858 RN7SL703P-201ENST00000578485 302 ntBASIC5.43□□□□□ -1.54
HTTP42858 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.43□□□□□ -1.54
HTTP42858 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.43□□□□□ -1.54
HTTP42858 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.43□□□□□ -1.54
HTTP42858 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.43□□□□□ -1.54
HTTP42858 CCNG2P1-201ENST00000549521 1000 ntBASIC5.43□□□□□ -1.54
HTTP42858 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.43□□□□□ -1.54
HTTP42858 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 UQCRBP1-201ENST00000421129 336 ntBASIC5.43□□□□□ -1.54
HTTP42858 RPS29P17-201ENST00000430795 166 ntBASIC5.43□□□□□ -1.54
HTTP42858 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 AC018628.1-201ENST00000624147 3819 ntBASIC5.43□□□□□ -1.54
HTTP42858 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HTTP42858 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.43□□□□□ -1.54
HTTP42858 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.43□□□□□ -1.54
HTTP42858 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.42□□□□□ -1.54
HTTP42858 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HTTP42858 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.42□□□□□ -1.54
HTTP42858 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC5.42□□□□□ -1.54
HTTP42858 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
HTTP42858 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 SNORA70.10-201ENST00000384515 134 ntBASIC5.42□□□□□ -1.54
HTTP42858 AL022722.2-201ENST00000402519 180 ntBASIC5.42□□□□□ -1.54
HTTP42858 SNORA11.1-201ENST00000408133 129 ntBASIC5.42□□□□□ -1.54
HTTP42858 RPS17P8-201ENST00000434525 335 ntBASIC5.42□□□□□ -1.54
HTTP42858 RPL7AP61-201ENST00000443410 636 ntBASIC5.42□□□□□ -1.54
HTTP42858 RN7SL189P-201ENST00000468631 289 ntBASIC5.42□□□□□ -1.54
HTTP42858 UQCRHP4-201ENST00000471686 272 ntBASIC5.42□□□□□ -1.54
HTTP42858 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.42□□□□□ -1.54
HTTP42858 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.42□□□□□ -1.54
HTTP42858 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HTTP42858 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.42□□□□□ -1.54
HTTP42858 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 PPIAP31-201ENST00000405422 495 ntBASIC5.42□□□□□ -1.54
HTTP42858 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.42□□□□□ -1.54
HTTP42858 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.42□□□□□ -1.54
HTTP42858 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.42□□□□□ -1.54
HTTP42858 AC008958.1-201ENST00000511047 682 ntBASIC5.42□□□□□ -1.54
HTTP42858 HMGN1P9-201ENST00000515212 298 ntBASIC5.42□□□□□ -1.54
HTTP42858 BUD31P1-201ENST00000521828 359 ntBASIC5.42□□□□□ -1.54
HTTP42858 MTCO1P49-201ENST00000523429 802 ntBASIC5.42□□□□□ -1.54
HTTP42858 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.42□□□□□ -1.54
HTTP42858 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.42□□□□□ -1.54
HTTP42858 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.42□□□□□ -1.54
HTTP42858 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
HTTP42858 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.42□□□□□ -1.54
HTTP42858 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HTTP42858 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HTTP42858 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.42□□□□□ -1.54
HTTP42858 RNU1-130P-201ENST00000363930 160 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms