Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGCLP35914 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCLP35914 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 RPL15P21-201ENST00000495592 567 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 RPSAP51-201ENST00000497462 645 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 AC091917.2-201ENST00000505002 744 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 IMPA1P1-201ENST00000510718 842 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 AC130364.2-201ENST00000528639 604 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 AP005901.4-201ENST00000577336 569 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 AC069307.1-201ENST00000602820 447 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 MIR6729-201ENST00000618194 65 ntBASIC5.29□□□□□ -1.56
HMGCLP35914 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCLP35914 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCLP35914 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGCLP35914 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
HMGCLP35914 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 MIR105-1-201ENST00000385222 81 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 MIR1286-201ENST00000408112 78 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 SNORA81-201ENST00000408493 178 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCLP35914 AC108075.1-201ENST00000424692 529 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 OR6C71P-201ENST00000432580 913 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 AC090018.1-201ENST00000434369 367 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 COPS8P2-201ENST00000473228 627 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 AC093827.1-201ENST00000480094 861 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 RPS4XP20-201ENST00000505751 772 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCLP35914 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCLP35914 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCLP35914 RN7SL290P-201ENST00000578661 300 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCLP35914 AC109309.2-201ENST00000612597 332 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 AC090527.3-201ENST00000619041 548 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
HMGCLP35914 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 AC092747.4-201ENST00000620519 1861 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCLP35914 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HMGCLP35914 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCLP35914 MTCO1P11-201ENST00000429111 1528 ntBASIC5.28□□□□□ -1.56
HMGCLP35914 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGCLP35914 AL034549.2-201ENST00000618285 3373 ntBASIC5.27□□□□□ -1.57
HMGCLP35914 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMGCLP35914 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HMGCLP35914 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCLP35914 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCLP35914 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCLP35914 CDC27P2-201ENST00000425026 1922 ntBASIC5.27□□□□□ -1.57
HMGCLP35914 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCLP35914 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCLP35914 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMGCLP35914 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCLP35914 OR1L6-202ENST00000373684 1044 ntBASIC5.27□□□□□ -1.57
HMGCLP35914 TRAV35-201ENST00000390462 330 ntBASIC5.27□□□□□ -1.57
HMGCLP35914 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCLP35914 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HMGCLP35914 AL136231.1-201ENST00000429407 730 ntBASIC5.27□□□□□ -1.57
HMGCLP35914 AL161722.2-201ENST00000434731 981 ntBASIC5.27□□□□□ -1.57
HMGCLP35914 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCLP35914 NOP56P2-201ENST00000447491 769 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms