Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 AL513548.1-201ENST00000562904 1724 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.52□□□□□ -1.36
TM4SF1P30408 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
TM4SF1P30408 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 AL731532.1-201ENST00000623972 4236 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.52□□□□□ -1.37
TM4SF1P30408 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.52□□□□□ -1.37
TM4SF1P30408 AC119751.6-201ENST00000416712 186 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.52□□□□□ -1.37
TM4SF1P30408 DNAJC19P7-201ENST00000428811 344 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 AC068287.1-201ENST00000430283 295 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.52□□□□□ -1.37
TM4SF1P30408 RPS29P10-201ENST00000439197 166 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.52□□□□□ -1.37
TM4SF1P30408 TPT1P12-201ENST00000448968 492 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.52□□□□□ -1.37
TM4SF1P30408 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TM4SF1P30408 MTCYBP14-201ENST00000457471 715 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 RN7SL354P-201ENST00000469282 294 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.52□□□□□ -1.37
TM4SF1P30408 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.52□□□□□ -1.37
TM4SF1P30408 OR5D2P-201ENST00000524390 911 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 AC008814.1-201ENST00000603797 406 ntBASIC6.52□□□□□ -1.37
TM4SF1P30408 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TM4SF1P30408 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.52□□□□□ -1.37
TM4SF1P30408 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
TM4SF1P30408 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM4SF1P30408 CASC19-243ENST00000641588 1546 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF1P30408 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
TM4SF1P30408 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF1P30408 GLULP6-201ENST00000399502 913 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 RPL10P10-201ENST00000403509 664 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF1P30408 RPL7P11-201ENST00000437586 658 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF1P30408 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF1P30408 AC009963.2-201ENST00000453431 138 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 GAPDHP56-201ENST00000506031 988 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 RNA5SP43-201ENST00000516559 110 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF1P30408 KCTD9P6-201ENST00000522306 950 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.51□□□□□ -1.37
TM4SF1P30408 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF1P30408 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF1P30408 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF1P30408 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.51□□□□□ -1.37
TM4SF1P30408 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF1P30408 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF1P30408 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF1P30408 AL391358.1-201ENST00000605342 190 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 AC244107.2-201ENST00000611773 76 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 AC020658.4-201ENST00000613987 684 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 MIR6758-201ENST00000620653 63 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 AC063952.1-203ENST00000634410 658 ntBASIC6.51□□□□□ -1.37
TM4SF1P30408 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TM4SF1P30408 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF1P30408 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF1P30408 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TM4SF1P30408 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF1P30408 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF1P30408 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TM4SF1P30408 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF1P30408 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
TM4SF1P30408 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.5□□□□□ -1.37
TM4SF1P30408 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.5□□□□□ -1.37
TM4SF1P30408 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
TM4SF1P30408 AL359715.3-201ENST00000569267 2123 ntBASIC6.5□□□□□ -1.37
TM4SF1P30408 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.5□□□□□ -1.37
TM4SF1P30408 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.5□□□□□ -1.37
TM4SF1P30408 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF1P30408 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF1P30408 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF1P30408 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.5□□□□□ -1.37
TM4SF1P30408 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TM4SF1P30408 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF1P30408 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.5□□□□□ -1.37
TM4SF1P30408 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TM4SF1P30408 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.5□□□□□ -1.37
TM4SF1P30408 AC007559.1-201ENST00000428736 355 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms