Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SULT1C2P2-201ENST00000562517 294 ntBASIC5.41□□□□□ -1.54
ABCD3P28288 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.41□□□□□ -1.54
ABCD3P28288 AC092121.1-201ENST00000569452 202 ntBASIC5.41□□□□□ -1.54
ABCD3P28288 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.41□□□□□ -1.54
ABCD3P28288 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
ABCD3P28288 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.41□□□□□ -1.54
ABCD3P28288 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.41□□□□□ -1.54
ABCD3P28288 FAM27E4-201ENST00000605259 342 ntBASIC5.41□□□□□ -1.54
ABCD3P28288 AC144521.1-201ENST00000607148 956 ntBASIC5.41□□□□□ -1.54
ABCD3P28288 AL391834.1-201ENST00000609609 560 ntBASIC5.41□□□□□ -1.54
ABCD3P28288 AC004477.3-201ENST00000614061 590 ntBASIC5.41□□□□□ -1.54
ABCD3P28288 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.41□□□□□ -1.54
ABCD3P28288 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.41□□□□□ -1.54
ABCD3P28288 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.41□□□□□ -1.54
ABCD3P28288 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.41□□□□□ -1.54
ABCD3P28288 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.41□□□□□ -1.54
ABCD3P28288 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ABCD3P28288 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
ABCD3P28288 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ABCD3P28288 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCD3P28288 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ABCD3P28288 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC093311.1-201ENST00000506586 2021 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 CASC19-260ENST00000641828 2001 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 METTL21EP-201ENST00000298105 713 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 MIR142-201ENST00000384835 87 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 LYPLA1P3-201ENST00000402650 695 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 MTCO3P4-201ENST00000419236 787 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCD3P28288 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC005189.1-201ENST00000431286 310 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCD3P28288 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC093166.4-201ENST00000457867 318 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 AL157777.1-201ENST00000468100 304 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 PPM1AP1-201ENST00000502740 1135 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 RPEP1-201ENST00000504507 658 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCD3P28288 TOMM22P4-201ENST00000511318 336 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 MTND5P21-201ENST00000531961 522 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 AC090424.1-201ENST00000535243 736 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCD3P28288 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCD3P28288 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 ZNF322P1-201ENST00000568013 1209 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC022884.3-201ENST00000579571 248 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 MIR548Y-201ENST00000582739 110 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCD3P28288 AC021851.1-201ENST00000608537 1082 ntBASIC5.4□□□□□ -1.54
ABCD3P28288 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ABCD3P28288 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ABCD3P28288 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ABCD3P28288 AC020656.2-201ENST00000613291 5309 ntBASIC5.4□□□□□ -1.55
ABCD3P28288 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ABCD3P28288 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.4□□□□□ -1.55
ABCD3P28288 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
ABCD3P28288 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
ABCD3P28288 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms