Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC8.64□□□□□ -1.03
CFTRP13569 HMGN1P9-201ENST00000515212 298 ntBASIC8.64□□□□□ -1.03
CFTRP13569 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.64□□□□□ -1.03
CFTRP13569 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.64□□□□□ -1.03
CFTRP13569 TVP23CP2-201ENST00000571473 623 ntBASIC8.64□□□□□ -1.03
CFTRP13569 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC8.64□□□□□ -1.03
CFTRP13569 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.64□□□□□ -1.03
CFTRP13569 BNIP3P35-201ENST00000604530 490 ntBASIC8.64□□□□□ -1.03
CFTRP13569 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CFTRP13569 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CFTRP13569 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.64□□□□□ -1.03
CFTRP13569 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CFTRP13569 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CFTRP13569 AC009951.1-201ENST00000623674 2614 ntBASIC8.64□□□□□ -1.03
CFTRP13569 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
CFTRP13569 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CFTRP13569 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 FABP7P1-201ENST00000424004 391 ntBASIC8.64□□□□□ -1.03
CFTRP13569 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.64□□□□□ -1.03
CFTRP13569 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.64□□□□□ -1.03
CFTRP13569 OR2B7P-201ENST00000429302 934 ntBASIC8.64□□□□□ -1.03
CFTRP13569 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.64□□□□□ -1.03
CFTRP13569 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.64□□□□□ -1.03
CFTRP13569 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.64□□□□□ -1.03
CFTRP13569 KPNA2P3-201ENST00000584190 848 ntBASIC8.64□□□□□ -1.03
CFTRP13569 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
CFTRP13569 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.64□□□□□ -1.03
CFTRP13569 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
CFTRP13569 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CFTRP13569 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CFTRP13569 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CFTRP13569 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CFTRP13569 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.63□□□□□ -1.03
CFTRP13569 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.63□□□□□ -1.03
CFTRP13569 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.63□□□□□ -1.03
CFTRP13569 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CFTRP13569 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CFTRP13569 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
CFTRP13569 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.63□□□□□ -1.03
CFTRP13569 RNA5SP397-201ENST00000391323 118 ntBASIC8.63□□□□□ -1.03
CFTRP13569 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CFTRP13569 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.63□□□□□ -1.03
CFTRP13569 IGBP1P4-201ENST00000503202 879 ntBASIC8.63□□□□□ -1.03
CFTRP13569 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC8.63□□□□□ -1.03
CFTRP13569 AC021483.2-201ENST00000567415 758 ntBASIC8.63□□□□□ -1.03
CFTRP13569 AC092653.1-201ENST00000608509 531 ntBASIC8.63□□□□□ -1.03
CFTRP13569 MIR6839-201ENST00000620425 113 ntBASIC8.63□□□□□ -1.03
CFTRP13569 CASC19-260ENST00000641828 2001 ntBASIC8.63□□□□□ -1.03
CFTRP13569 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CFTRP13569 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CFTRP13569 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.62□□□□□ -1.03
CFTRP13569 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.62□□□□□ -1.03
CFTRP13569 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFTRP13569 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CFTRP13569 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.62□□□□□ -1.03
CFTRP13569 RN7SKP227-201ENST00000364445 330 ntBASIC8.62□□□□□ -1.03
CFTRP13569 RPEP3-201ENST00000425462 676 ntBASIC8.62□□□□□ -1.03
CFTRP13569 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.62□□□□□ -1.03
CFTRP13569 AC026402.1-201ENST00000513642 170 ntBASIC8.62□□□□□ -1.03
CFTRP13569 AC079064.1-201ENST00000528365 362 ntBASIC8.62□□□□□ -1.03
CFTRP13569 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC8.62□□□□□ -1.03
CFTRP13569 MIR6716-201ENST00000613413 80 ntBASIC8.62□□□□□ -1.03
CFTRP13569 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFTRP13569 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CFTRP13569 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFTRP13569 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CFTRP13569 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CFTRP13569 AL354868.1-201ENST00000417077 482 ntBASIC8.61□□□□□ -1.03
CFTRP13569 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.61□□□□□ -1.03
CFTRP13569 MRPS21P2-201ENST00000424704 264 ntBASIC8.61□□□□□ -1.03
CFTRP13569 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 AC017019.1-201ENST00000426129 261 ntBASIC8.61□□□□□ -1.03
CFTRP13569 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 AC000111.2-201ENST00000448200 210 ntBASIC8.61□□□□□ -1.03
CFTRP13569 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.61□□□□□ -1.03
CFTRP13569 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.61□□□□□ -1.03
CFTRP13569 AC116562.1-201ENST00000485355 781 ntBASIC8.61□□□□□ -1.03
CFTRP13569 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.61□□□□□ -1.03
CFTRP13569 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.61□□□□□ -1.03
CFTRP13569 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.61□□□□□ -1.03
CFTRP13569 OR56B2P-202ENST00000641377 2453 ntBASIC8.61□□□□□ -1.03
CFTRP13569 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFTRP13569 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
CFTRP13569 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms