Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC138761.5-201ENST00000433967 325 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 MTND2P40-201ENST00000436718 841 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AL359265.1-201ENST00000440296 795 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AC023271.1-201ENST00000445936 1090 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.22□□□□□ -1.41
COL1A1P02452 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 MRPS33P2-201ENST00000507850 322 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AP003080.1-202ENST00000526526 915 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 AL031320.1-201ENST00000604177 357 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 BNIP3P35-201ENST00000604530 490 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AL133406.3-201ENST00000606817 541 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AP000346.3-201ENST00000622821 210 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AC135068.12-201ENST00000637370 931 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL1A1P02452 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL1A1P02452 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.22□□□□□ -1.41
COL1A1P02452 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 RNU11-201ENST00000387069 134 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL1A1P02452 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL1A1P02452 AC019050.1-201ENST00000418508 492 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.22□□□□□ -1.41
COL1A1P02452 RPL7P11-201ENST00000437586 658 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 RPS24P16-201ENST00000497294 392 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.22□□□□□ -1.41
COL1A1P02452 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.22□□□□□ -1.41
COL1A1P02452 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 GCSHP4-201ENST00000538792 439 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 UBE2FP2-201ENST00000566646 462 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.22□□□□□ -1.41
COL1A1P02452 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.22□□□□□ -1.41
COL1A1P02452 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.22□□□□□ -1.41
COL1A1P02452 AL360012.1-201ENST00000602813 131 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AC007786.3-201ENST00000615154 596 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
COL1A1P02452 AL591135.1-201ENST00000401578 5914 ntBASIC6.21□□□□□ -1.41
COL1A1P02452 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL1A1P02452 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL1A1P02452 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL1A1P02452 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 AC132825.1-201ENST00000463573 2247 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL1A1P02452 MAPK10-304ENST00000641341 3984 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL1A1P02452 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL1A1P02452 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.21□□□□□ -1.42
COL1A1P02452 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
COL1A1P02452 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL1A1P02452 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL1A1P02452 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL1A1P02452 GAPDHP15-201ENST00000398586 975 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 SNORA77-201ENST00000408716 125 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.21□□□□□ -1.42
COL1A1P02452 CHEK2P3-201ENST00000416118 248 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.21□□□□□ -1.42
COL1A1P02452 RPL5P22-201ENST00000480199 884 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 AC140172.1-201ENST00000502928 141 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL1A1P02452 PRELID3BP5-201ENST00000508612 460 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 COX6B1P5-201ENST00000509843 249 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 OR7E128P-201ENST00000532736 1024 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 BGLT3-201ENST00000564523 994 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL1A1P02452 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL1A1P02452 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL1A1P02452 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.21□□□□□ -1.42
COL1A1P02452 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
COL1A1P02452 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.2□□□□□ -1.42
COL1A1P02452 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.2□□□□□ -1.42
COL1A1P02452 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.2□□□□□ -1.42
COL1A1P02452 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.2□□□□□ -1.42
COL1A1P02452 AC090018.1-201ENST00000434369 367 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms