Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 Y_RNA.72-201ENST00000362894 103 ntBASIC6.55□□□□□ -1.36
ALX3O95076 RNU6-839P-201ENST00000363347 108 ntBASIC6.55□□□□□ -1.36
ALX3O95076 RNU5E-5P-201ENST00000365379 116 ntBASIC6.55□□□□□ -1.36
ALX3O95076 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 Y_RNA.431-201ENST00000384086 102 ntBASIC6.55□□□□□ -1.36
ALX3O95076 MIR142-201ENST00000384835 87 ntBASIC6.55□□□□□ -1.36
ALX3O95076 SNRPEP2-201ENST00000397592 279 ntBASIC6.55□□□□□ -1.36
ALX3O95076 RPL5P35-201ENST00000398869 816 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AL353151.1-201ENST00000402406 604 ntBASIC6.55□□□□□ -1.36
ALX3O95076 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.55□□□□□ -1.36
ALX3O95076 RBMY2FP-202ENST00000420346 1263 ntBASIC6.55□□□□□ -1.36
ALX3O95076 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.55□□□□□ -1.36
ALX3O95076 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.55□□□□□ -1.36
ALX3O95076 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.55□□□□□ -1.36
ALX3O95076 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC6.55□□□□□ -1.36
ALX3O95076 FO393419.1-201ENST00000443746 355 ntBASIC6.55□□□□□ -1.36
ALX3O95076 SPRYD7P1-201ENST00000443861 570 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC108463.1-201ENST00000450258 347 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC092570.2-201ENST00000452117 1143 ntBASIC6.55□□□□□ -1.36
ALX3O95076 ARPC3P2-201ENST00000457786 533 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC093166.4-201ENST00000457867 318 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AL590326.1-201ENST00000460857 334 ntBASIC6.55□□□□□ -1.36
ALX3O95076 RN7SL55P-201ENST00000464534 297 ntBASIC6.55□□□□□ -1.36
ALX3O95076 RPL39P36-201ENST00000490784 156 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC011352.3-201ENST00000505162 593 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.55□□□□□ -1.36
ALX3O95076 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.55□□□□□ -1.36
ALX3O95076 GAPDHP31-201ENST00000509325 1014 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC105914.1-201ENST00000511798 226 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 RN7SKP14-201ENST00000516000 329 ntBASIC6.55□□□□□ -1.36
ALX3O95076 RN7SKP31-201ENST00000516354 278 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.55□□□□□ -1.36
ALX3O95076 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 AC093027.1-201ENST00000546698 429 ntBASIC6.55□□□□□ -1.36
ALX3O95076 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ALX3O95076 AC137768.1-201ENST00000549998 553 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.55□□□□□ -1.36
ALX3O95076 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.55□□□□□ -1.36
ALX3O95076 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.55□□□□□ -1.36
ALX3O95076 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.55□□□□□ -1.36
ALX3O95076 AC015917.1-201ENST00000579654 510 ntBASIC6.55□□□□□ -1.36
ALX3O95076 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.55□□□□□ -1.36
ALX3O95076 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 AC011453.2-201ENST00000603737 729 ntBASIC6.55□□□□□ -1.36
ALX3O95076 SUGT1P3-202ENST00000604259 383 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AP001506.1-201ENST00000615444 211 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC027807.2-201ENST00000616099 408 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC108479.2-201ENST00000617314 601 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC245028.3-201ENST00000618197 285 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC073488.8-201ENST00000631952 757 ntBASIC6.55□□□□□ -1.36
ALX3O95076 MIR193BHG-210ENST00000641327 515 ntBASIC6.55□□□□□ -1.36
ALX3O95076 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.55□□□□□ -1.36
ALX3O95076 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.55□□□□□ -1.36
ALX3O95076 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ALX3O95076 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.55□□□□□ -1.36
ALX3O95076 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 AC106800.1-201ENST00000501221 1362 ntBASIC6.55□□□□□ -1.36
ALX3O95076 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ALX3O95076 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.55□□□□□ -1.36
ALX3O95076 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.55□□□□□ -1.36
ALX3O95076 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.55□□□□□ -1.36
ALX3O95076 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ALX3O95076 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ALX3O95076 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ALX3O95076 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
ALX3O95076 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ALX3O95076 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ALX3O95076 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.54□□□□□ -1.36
ALX3O95076 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ALX3O95076 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
ALX3O95076 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ALX3O95076 AC007923.2-201ENST00000584218 1591 ntBASIC6.54□□□□□ -1.36
ALX3O95076 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.54□□□□□ -1.36
ALX3O95076 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
ALX3O95076 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ALX3O95076 OR56A4-201ENST00000330728 1209 ntBASIC6.54□□□□□ -1.36
ALX3O95076 OR11H13P-201ENST00000359695 979 ntBASIC6.54□□□□□ -1.36
ALX3O95076 RNA5SP389-201ENST00000362610 115 ntBASIC6.54□□□□□ -1.36
ALX3O95076 RNA5SP226-201ENST00000362653 115 ntBASIC6.54□□□□□ -1.36
ALX3O95076 Y_RNA.144-201ENST00000363521 113 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms