Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.95□□□□□ -1.62
LMX1BO60663 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC135178.6-201ENST00000605314 398 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 AC006946.3-201ENST00000609791 756 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 AC018809.2-201ENST00000602436 3823 ntBASIC4.95□□□□□ -1.62
LMX1BO60663 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LMX1BO60663 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.95□□□□□ -1.62
LMX1BO60663 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
LMX1BO60663 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 RNA5SP46-201ENST00000362370 120 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 Y_RNA.62-201ENST00000362840 99 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 RN7SKP145-201ENST00000363291 303 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 SNORA27.3-201ENST00000364937 134 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 SNORA70.6-201ENST00000383934 134 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.94□□□□□ -1.62
LMX1BO60663 AL158827.1-201ENST00000416300 391 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 RNGTTP1-201ENST00000420965 728 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 MTCO2P1-201ENST00000424648 477 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 UBE2D3P3-201ENST00000426992 425 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.94□□□□□ -1.62
LMX1BO60663 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 LRRC37A14P-201ENST00000452297 462 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AC078857.1-201ENST00000469870 667 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 SIAH1P1-201ENST00000479411 923 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 RPL32P33-201ENST00000487023 394 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.94□□□□□ -1.62
LMX1BO60663 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.94□□□□□ -1.62
LMX1BO60663 GAPDHP71-201ENST00000511530 1003 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AC074087.1-201ENST00000512059 724 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.94□□□□□ -1.62
LMX1BO60663 AC117525.1-201ENST00000515228 503 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.94□□□□□ -1.62
LMX1BO60663 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.94□□□□□ -1.62
LMX1BO60663 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.94□□□□□ -1.62
LMX1BO60663 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
LMX1BO60663 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.94□□□□□ -1.62
LMX1BO60663 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 AC091057.3-201ENST00000602684 733 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AL450270.1-201ENST00000606160 391 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.94□□□□□ -1.62
LMX1BO60663 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.94□□□□□ -1.62
LMX1BO60663 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.94□□□□□ -1.62
LMX1BO60663 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LMX1BO60663 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.94□□□□□ -1.62
LMX1BO60663 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
LMX1BO60663 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.94□□□□□ -1.62
LMX1BO60663 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.94□□□□□ -1.62
LMX1BO60663 CASC19-261ENST00000641853 1638 ntBASIC4.94□□□□□ -1.62
LMX1BO60663 AC006206.1-201ENST00000544842 3387 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.93□□□□□ -1.62
LMX1BO60663 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
LMX1BO60663 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.93□□□□□ -1.62
LMX1BO60663 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 Z95114.1-201ENST00000624264 14574 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 RNU6-618P-201ENST00000363518 112 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.93□□□□□ -1.62
LMX1BO60663 NIFKP3-201ENST00000417799 865 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AK4P4-201ENST00000419465 646 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 OR5W1P-201ENST00000423705 938 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 OR10T1P-201ENST00000424327 947 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 USP12PY-201ENST00000427677 1064 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 RPL5P2-201ENST00000429598 854 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AC023271.1-201ENST00000445936 1090 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms