Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC099654.6-201ENST00000636487 512 ntBASIC5.74□□□□□ -1.49
O00370 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
O00370 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
O00370 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
O00370 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
O00370 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.74□□□□□ -1.49
O00370 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
O00370 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
O00370 AC007342.5-201ENST00000571340 2142 ntBASIC5.74□□□□□ -1.49
O00370 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
O00370 HSPA8P14-201ENST00000552265 1805 ntBASIC5.74□□□□□ -1.49
O00370 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.74□□□□□ -1.49
O00370 AL603750.1-201ENST00000624216 1717 ntBASIC5.74□□□□□ -1.49
O00370 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
O00370 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
O00370 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.73□□□□□ -1.49
O00370 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.73□□□□□ -1.49
O00370 PPIAP20-201ENST00000449839 135 ntBASIC5.73□□□□□ -1.49
O00370 AC007386.1-201ENST00000455212 582 ntBASIC5.73□□□□□ -1.49
O00370 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
O00370 AC092754.1-201ENST00000472975 479 ntBASIC5.73□□□□□ -1.49
O00370 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.73□□□□□ -1.49
O00370 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.73□□□□□ -1.49
O00370 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.73□□□□□ -1.49
O00370 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.73□□□□□ -1.49
O00370 RBM22P1-201ENST00000578589 1214 ntBASIC5.73□□□□□ -1.49
O00370 RN7SL356P-201ENST00000582228 248 ntBASIC5.73□□□□□ -1.49
O00370 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 AC006363.1-201ENST00000603806 463 ntBASIC5.73□□□□□ -1.49
O00370 SNORA35B-201ENST00000607417 129 ntBASIC5.73□□□□□ -1.49
O00370 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.73□□□□□ -1.49
O00370 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 AC079395.2-201ENST00000610982 737 ntBASIC5.73□□□□□ -1.49
O00370 AC107905.1-201ENST00000616204 426 ntBASIC5.73□□□□□ -1.49
O00370 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 FRG1EP-201ENST00000634469 770 ntBASIC5.73□□□□□ -1.49
O00370 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
O00370 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
O00370 CUL4AP1-201ENST00000514750 1863 ntBASIC5.73□□□□□ -1.49
O00370 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.73□□□□□ -1.49
O00370 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
O00370 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
O00370 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.72□□□□□ -1.49
O00370 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.72□□□□□ -1.49
O00370 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 RN7SKP160-201ENST00000363804 340 ntBASIC5.72□□□□□ -1.49
O00370 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.72□□□□□ -1.49
O00370 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
O00370 RNU1-77P-201ENST00000390868 162 ntBASIC5.72□□□□□ -1.49
O00370 RNA5SP339-201ENST00000390987 122 ntBASIC5.72□□□□□ -1.49
O00370 AC009804.1-201ENST00000400949 179 ntBASIC5.72□□□□□ -1.49
O00370 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.72□□□□□ -1.49
O00370 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.72□□□□□ -1.49
O00370 DSTNP5-201ENST00000427921 523 ntBASIC5.72□□□□□ -1.49
O00370 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.72□□□□□ -1.49
O00370 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.72□□□□□ -1.49
O00370 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.72□□□□□ -1.49
O00370 AGGF1P3-201ENST00000493675 1213 ntBASIC5.72□□□□□ -1.49
O00370 AC108693.1-201ENST00000496068 432 ntBASIC5.72□□□□□ -1.49
O00370 OR52A4P-203ENST00000498233 1014 ntBASIC5.72□□□□□ -1.49
O00370 IGBP1P4-201ENST00000503202 879 ntBASIC5.72□□□□□ -1.49
O00370 RPEP1-201ENST00000504507 658 ntBASIC5.72□□□□□ -1.49
O00370 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.72□□□□□ -1.49
O00370 AC126177.5-201ENST00000549599 178 ntBASIC5.72□□□□□ -1.49
O00370 EIF1AXP2-201ENST00000555940 413 ntBASIC5.72□□□□□ -1.49
O00370 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.72□□□□□ -1.49
O00370 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.72□□□□□ -1.49
O00370 AC244107.2-201ENST00000611773 76 ntBASIC5.72□□□□□ -1.49
O00370 AC026367.3-201ENST00000619032 590 ntBASIC5.72□□□□□ -1.49
O00370 AC005840.5-201ENST00000619166 599 ntBASIC5.72□□□□□ -1.49
O00370 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
O00370 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms