Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AC005244.1-201ENST00000582566 339 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 MIR4660-201ENST00000583549 74 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AC073046.2-201ENST00000604756 527 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AC006924.1-201ENST00000610750 559 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 MIR6849-201ENST00000618543 69 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 MIR7159-201ENST00000620587 66 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AC003992.1-201ENST00000635364 557 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AL357140.4-201ENST00000636827 412 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 MIR3974-201ENST00000637126 96 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AC112255.1-201ENST00000624070 2493 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 GVINP1-202ENST00000531871 7271 ntBASIC6.61□□□□□ -1.35
CCDC66A2RUB6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC66A2RUB6 AC120338.1-201ENST00000625074 1541 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC017079.1-201ENST00000333650 415 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 OR5H2-201ENST00000355273 945 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 SNORD116-12-201ENST00000384468 92 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 MIR551B-201ENST00000384984 96 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 RNU6-1242P-201ENST00000391052 103 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 RNA5SP431-201ENST00000410312 120 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC015977.1-201ENST00000418887 292 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC006509.1-201ENST00000420788 634 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AP003385.1-201ENST00000426387 893 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 MTND4P32-201ENST00000437189 1237 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL356121.1-201ENST00000442911 156 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 SEPT14P24-201ENST00000447236 180 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 MTND1P29-201ENST00000448112 647 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 GTF2IP12-201ENST00000456547 356 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC009567.2-201ENST00000502989 349 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC095052.1-201ENST00000509955 863 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 MINOS1P4-201ENST00000515470 318 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 SNORA3.4-201ENST00000515969 96 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL356057.1-201ENST00000533798 831 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL589863.1-201ENST00000595383 631 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC092106.3-201ENST00000611308 722 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AC009090.3-201ENST00000616553 565 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 MIR6813-201ENST00000621638 56 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AL390318.1-201ENST00000624564 687 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 AP001029.2-203ENST00000589795 4910 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC66A2RUB6 ZNF876P-202ENST00000398732 1485 ntBASIC6.6□□□□□ -1.35
CCDC66A2RUB6 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms