Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 AC063952.2-201ENST00000498792 1227 ntBASIC25.64■■□□□ 1.7
SPG7Q9UQ90 AC022616.7-201ENST00000525383 220 ntBASIC25.64■■□□□ 1.7
SPG7Q9UQ90 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 AL138966.2-201ENST00000621997 464 ntBASIC25.64■■□□□ 1.7
SPG7Q9UQ90 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.64■■□□□ 1.7
SPG7Q9UQ90 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SPG7Q9UQ90 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.64■■□□□ 1.69
SPG7Q9UQ90 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 AC117947.1-201ENST00000427448 529 ntBASIC25.63■■□□□ 1.69
SPG7Q9UQ90 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 LINC01238-205ENST00000567549 1107 ntBASIC25.63■■□□□ 1.69
SPG7Q9UQ90 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 AC010653.2-201ENST00000623505 997 ntBASIC25.63■■□□□ 1.69
SPG7Q9UQ90 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPG7Q9UQ90 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 AP001271.2-201ENST00000624018 1556 ntBASIC25.62■■□□□ 1.69
SPG7Q9UQ90 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 AC007663.1-201ENST00000438948 1240 ntBASIC25.62■■□□□ 1.69
SPG7Q9UQ90 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SPG7Q9UQ90 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.61■■□□□ 1.69
SPG7Q9UQ90 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 AL160286.2-201ENST00000567150 934 ntBASIC25.6■■□□□ 1.69
SPG7Q9UQ90 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 AC092338.2-201ENST00000568827 1415 ntBASIC25.6■■□□□ 1.69
SPG7Q9UQ90 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
SPG7Q9UQ90 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 AC139887.4-201ENST00000607877 719 ntBASIC25.59■■□□□ 1.69
SPG7Q9UQ90 AL023803.3-201ENST00000615559 522 ntBASIC25.59■■□□□ 1.69
SPG7Q9UQ90 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.59■■□□□ 1.69
SPG7Q9UQ90 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms