Protein–RNA interactions for Protein: Q9NXP7

GIN1, Gypsy retrotransposon integrase-like protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1Q9NXP7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 NEFHP1-201ENST00000412845 2629 ntBASIC18.53■□□□□ 0.56
GIN1Q9NXP7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 GUSBP6-202ENST00000438529 1198 ntBASIC18.53■□□□□ 0.56
GIN1Q9NXP7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 AC116562.4-201ENST00000641316 2276 ntBASIC18.53■□□□□ 0.56
GIN1Q9NXP7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GIN1Q9NXP7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 SLC29A4P1-201ENST00000398760 971 ntBASIC18.52■□□□□ 0.56
GIN1Q9NXP7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.52■□□□□ 0.56
GIN1Q9NXP7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
GIN1Q9NXP7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GIN1Q9NXP7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 AC073210.2-201ENST00000430369 194 ntBASIC18.51■□□□□ 0.55
GIN1Q9NXP7 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.51■□□□□ 0.55
GIN1Q9NXP7 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 MIR4758-201ENST00000577688 71 ntBASIC18.51■□□□□ 0.55
GIN1Q9NXP7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.51■□□□□ 0.55
GIN1Q9NXP7 AC009237.14-201ENST00000609975 1594 ntBASIC18.51■□□□□ 0.55
GIN1Q9NXP7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 AC090192.1-201ENST00000517740 490 ntBASIC18.5■□□□□ 0.55
GIN1Q9NXP7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
GIN1Q9NXP7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms