Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTPS2Q9NRF8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTPS2Q9NRF8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTPS2Q9NRF8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.2■□□□□ 0.5
CTPS2Q9NRF8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.2■□□□□ 0.5
CTPS2Q9NRF8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 AC091874.3-201ENST00000512672 1195 ntBASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 AC098934.4-201ENST00000564127 592 ntBASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.19■□□□□ 0.5
CTPS2Q9NRF8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 AC018445.3-201ENST00000624177 1945 ntBASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 HLA-G-202ENST00000376815 851 ntBASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 HLA-G-203ENST00000376818 1127 ntBASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 HLA-L-209ENST00000420110 1011 ntBASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTPS2Q9NRF8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTPS2Q9NRF8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 AL020996.1-203ENST00000536896 2307 ntBASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTPS2Q9NRF8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms