Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN4Q9NQP4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PFDN4Q9NQP4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 PTBP1P-201ENST00000554374 1601 ntBASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 DUX4L16-201ENST00000555130 1264 ntBASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 AL137784.2-201ENST00000607332 1000 ntBASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN4Q9NQP4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 AC007322.1-201ENST00000426983 750 ntBASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 AC016405.3-201ENST00000607710 860 ntBASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 AC008694.1-202ENST00000636953 945 ntBASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 AC093484.2-201ENST00000580996 2166 ntBASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PFDN4Q9NQP4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN4Q9NQP4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms