Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 AC073210.2-201ENST00000430369 194 ntBASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC68Q9H2F9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 AL138781.1-201ENST00000566567 1274 ntBASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC68Q9H2F9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CCDC68Q9H2F9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 AC090192.1-201ENST00000517740 490 ntBASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC68Q9H2F9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 AC092368.3-202ENST00000574180 1591 ntBASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 AC018553.1-201ENST00000616682 1458 ntBASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms