Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 AC010980.2-201ENST00000587099 1412 ntBASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 HLA-G-202ENST00000376815 851 ntBASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 HLA-G-203ENST00000376818 1127 ntBASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXP3Q9BZS1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 PRORSD1P-201ENST00000295112 541 ntBASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 AC097658.1-201ENST00000475555 843 ntBASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXP3Q9BZS1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 AC093503.3-201ENST00000624917 2352 ntBASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 MYC-209ENST00000641252 345 ntBASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXP3Q9BZS1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms