Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
ABCA3Q99758 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC26.24■■□□□ 1.79
ABCA3Q99758 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.24■■□□□ 1.79
ABCA3Q99758 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC26.24■■□□□ 1.79
ABCA3Q99758 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC26.24■■□□□ 1.79
ABCA3Q99758 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.24■■□□□ 1.79
ABCA3Q99758 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA3Q99758 LINC01311-201ENST00000565162 1445 ntBASIC26.23■■□□□ 1.79
ABCA3Q99758 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA3Q99758 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
ABCA3Q99758 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA3Q99758 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.23■■□□□ 1.79
ABCA3Q99758 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.23■■□□□ 1.79
ABCA3Q99758 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC26.23■■□□□ 1.79
ABCA3Q99758 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC26.23■■□□□ 1.79
ABCA3Q99758 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA3Q99758 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
ABCA3Q99758 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA3Q99758 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA3Q99758 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.23■■□□□ 1.79
ABCA3Q99758 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
ABCA3Q99758 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA3Q99758 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC26.22■■□□□ 1.79
ABCA3Q99758 SDHD-206ENST00000528182 754 ntTSL 3 BASIC26.22■■□□□ 1.79
ABCA3Q99758 KLK8-205ENST00000593490 267 ntTSL 3 BASIC26.22■■□□□ 1.79
ABCA3Q99758 AL031432.5-201ENST00000641059 760 ntBASIC26.22■■□□□ 1.79
ABCA3Q99758 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.22■■□□□ 1.79
ABCA3Q99758 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC26.22■■□□□ 1.79
ABCA3Q99758 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 PRELID1P1-202ENST00000567272 903 ntBASIC26.22■■□□□ 1.79
ABCA3Q99758 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC26.22■■□□□ 1.79
ABCA3Q99758 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC26.22■■□□□ 1.79
ABCA3Q99758 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA3Q99758 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC26.22■■□□□ 1.79
ABCA3Q99758 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA3Q99758 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA3Q99758 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA3Q99758 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC26.21■■□□□ 1.79
ABCA3Q99758 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ABCA3Q99758 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC26.21■■□□□ 1.79
ABCA3Q99758 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC26.21■■□□□ 1.79
ABCA3Q99758 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC26.21■■□□□ 1.79
ABCA3Q99758 WDR6-223ENST00000627177 207 ntTSL 2 BASIC26.21■■□□□ 1.79
ABCA3Q99758 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.21■■□□□ 1.79
ABCA3Q99758 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.21■■□□□ 1.79
ABCA3Q99758 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA3Q99758 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA3Q99758 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA3Q99758 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.2■■□□□ 1.79
ABCA3Q99758 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
ABCA3Q99758 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ABCA3Q99758 AL160286.2-201ENST00000567150 934 ntBASIC26.2■■□□□ 1.79
ABCA3Q99758 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC26.2■■□□□ 1.79
ABCA3Q99758 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.2■■□□□ 1.79
ABCA3Q99758 CD37-204ENST00000535669 1674 ntTSL 2 BASIC26.2■■□□□ 1.78
ABCA3Q99758 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA3Q99758 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA3Q99758 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.2■■□□□ 1.78
ABCA3Q99758 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA3Q99758 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA3Q99758 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA3Q99758 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC26.19■■□□□ 1.78
ABCA3Q99758 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC26.19■■□□□ 1.78
ABCA3Q99758 GCSHP2-201ENST00000560971 527 ntBASIC26.19■■□□□ 1.78
ABCA3Q99758 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA3Q99758 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA3Q99758 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
ABCA3Q99758 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC26.19■■□□□ 1.78
ABCA3Q99758 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC26.19■■□□□ 1.78
ABCA3Q99758 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.19■■□□□ 1.78
ABCA3Q99758 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC26.19■■□□□ 1.78
ABCA3Q99758 MIR3180-1-201ENST00000580374 94 ntBASIC26.19■■□□□ 1.78
ABCA3Q99758 MIR3180-3-201ENST00000584616 94 ntBASIC26.19■■□□□ 1.78
ABCA3Q99758 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ABCA3Q99758 AC004263.2-201ENST00000617183 678 ntBASIC26.19■■□□□ 1.78
ABCA3Q99758 PLK5-205ENST00000642079 1969 ntBASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms