Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.08■□□□□ 0.64
PKP4Q99569 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.08■□□□□ 0.64
PKP4Q99569 PRKY-204ENST00000533551 1019 ntBASIC19.08■□□□□ 0.64
PKP4Q99569 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.08■□□□□ 0.64
PKP4Q99569 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PKP4Q99569 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.08■□□□□ 0.64
PKP4Q99569 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKP4Q99569 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PKP4Q99569 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKP4Q99569 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PKP4Q99569 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PKP4Q99569 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PKP4Q99569 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
PKP4Q99569 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PKP4Q99569 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.07■□□□□ 0.64
PKP4Q99569 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.07■□□□□ 0.64
PKP4Q99569 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.07■□□□□ 0.64
PKP4Q99569 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.07■□□□□ 0.64
PKP4Q99569 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PKP4Q99569 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.06■□□□□ 0.64
PKP4Q99569 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.06■□□□□ 0.64
PKP4Q99569 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.06■□□□□ 0.64
PKP4Q99569 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.06■□□□□ 0.64
PKP4Q99569 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.06■□□□□ 0.64
PKP4Q99569 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.06■□□□□ 0.64
PKP4Q99569 AL023875.1-201ENST00000640777 796 ntBASIC19.06■□□□□ 0.64
PKP4Q99569 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.06■□□□□ 0.64
PKP4Q99569 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PKP4Q99569 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.05■□□□□ 0.64
PKP4Q99569 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.05■□□□□ 0.64
PKP4Q99569 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 YBX1P10-201ENST00000444752 975 ntBASIC19.05■□□□□ 0.64
PKP4Q99569 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.05■□□□□ 0.64
PKP4Q99569 RN7SL471P-201ENST00000580476 299 ntBASIC19.05■□□□□ 0.64
PKP4Q99569 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.05■□□□□ 0.64
PKP4Q99569 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.05■□□□□ 0.64
PKP4Q99569 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.05■□□□□ 0.64
PKP4Q99569 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.05■□□□□ 0.64
PKP4Q99569 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PKP4Q99569 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PKP4Q99569 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PKP4Q99569 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PKP4Q99569 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PKP4Q99569 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PKP4Q99569 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.04■□□□□ 0.64
PKP4Q99569 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.04■□□□□ 0.64
PKP4Q99569 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.04■□□□□ 0.64
PKP4Q99569 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.04■□□□□ 0.64
PKP4Q99569 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.04■□□□□ 0.64
PKP4Q99569 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PKP4Q99569 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PKP4Q99569 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PKP4Q99569 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.03■□□□□ 0.64
PKP4Q99569 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms