Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HAPLN3Q96S86 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 KRT16P5-201ENST00000455284 522 ntBASIC20.28■□□□□ 0.84
HAPLN3Q96S86 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HAPLN3Q96S86 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 TUBB8P6-201ENST00000436895 1288 ntBASIC20.27■□□□□ 0.84
HAPLN3Q96S86 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HAPLN3Q96S86 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HAPLN3Q96S86 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.27■□□□□ 0.83
HAPLN3Q96S86 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.27■□□□□ 0.83
HAPLN3Q96S86 AC125437.2-201ENST00000625180 2167 ntBASIC20.27■□□□□ 0.83
HAPLN3Q96S86 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 FAM197Y4-202ENST00000622692 608 ntBASIC20.26■□□□□ 0.83
HAPLN3Q96S86 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.26■□□□□ 0.83
HAPLN3Q96S86 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms