Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 MIR3652-201ENST00000579335 131 ntBASIC16.73■□□□□ 0.27
CSMD1Q96PZ7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 PRSS44-201ENST00000515154 1146 ntBASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 AC010653.2-201ENST00000623505 997 ntBASIC16.72■□□□□ 0.27
CSMD1Q96PZ7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 PTBP1P-201ENST00000554374 1601 ntBASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 AC022898.2-201ENST00000616822 1312 ntBASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 AL024507.2-201ENST00000606070 2574 ntBASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 KRT18P13-201ENST00000400056 1290 ntBASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 PCDHAC2-203ENST00000615316 3011 ntBASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 AC116562.4-202ENST00000641738 218 ntBASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD1Q96PZ7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 SPDYE15P-201ENST00000424157 909 ntBASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CSMD1Q96PZ7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 AL031432.5-201ENST00000641059 760 ntBASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 KRT8P36-201ENST00000489121 1440 ntBASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 AC141257.4-201ENST00000634557 245 ntBASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 AC136944.6-201ENST00000634818 245 ntBASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD1Q96PZ7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms