Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC239809.2-201ENST00000415381 517 ntBASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 AC125437.2-201ENST00000625180 2167 ntBASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 AC097493.4-201ENST00000641197 219 ntBASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.54■■□□□ 1.04
RPGRIP1Q96KN7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 AL135905.2-201ENST00000584934 1404 ntBASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPGRIP1Q96KN7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 TNXA-203ENST00000507684 2038 ntBASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 AC007322.3-201ENST00000426526 701 ntBASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 AL355075.4-201ENST00000554988 638 ntBASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 AC113410.3-201ENST00000623366 203 ntBASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPGRIP1Q96KN7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RPGRIP1Q96KN7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 TMPOP1-202ENST00000424642 1267 ntBASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 AC133681.1-201ENST00000465482 601 ntBASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 AC012306.2-201ENST00000609350 630 ntBASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms