Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF25Q96BH1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 AL121832.2-201ENST00000610979 668 ntBASIC20.54■□□□□ 0.88
RNF25Q96BH1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.54■□□□□ 0.88
RNF25Q96BH1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF25Q96BH1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF25Q96BH1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF25Q96BH1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNF25Q96BH1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 DUSP5P2-201ENST00000426873 1033 ntBASIC20.52■□□□□ 0.88
RNF25Q96BH1 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF25Q96BH1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF25Q96BH1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF25Q96BH1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RNF25Q96BH1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 AC018553.1-201ENST00000616682 1458 ntBASIC20.51■□□□□ 0.87
RNF25Q96BH1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms