Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 NBPF21P-201ENST00000425093 1451 ntBASIC17.27■□□□□ 0.36
TMEM54Q969K7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 POU5F1P3-201ENST00000428824 1078 ntBASIC17.27■□□□□ 0.36
TMEM54Q969K7 TUBB8P6-201ENST00000436895 1288 ntBASIC17.27■□□□□ 0.36
TMEM54Q969K7 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM54Q969K7 AC006058.3-201ENST00000606217 1069 ntBASIC17.27■□□□□ 0.36
TMEM54Q969K7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM54Q969K7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM54Q969K7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM54Q969K7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM54Q969K7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM54Q969K7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM54Q969K7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 AC073648.6-201ENST00000641589 218 ntBASIC17.26■□□□□ 0.35
TMEM54Q969K7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM54Q969K7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM54Q969K7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 RN7SL471P-201ENST00000580476 299 ntBASIC17.25■□□□□ 0.35
TMEM54Q969K7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM54Q969K7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TMEM54Q969K7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM54Q969K7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM54Q969K7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms